Salicibibacter halophilus: EPH95_08490
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Entry
EPH95_08490 CDS
T06083
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sale
Salicibibacter halophilus
Brite
KEGG Orthology (KO) [BR:
sale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sale03016
]
EPH95_08490 (thpR)
Enzymes [BR:
sale01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EPH95_08490 (thpR)
Transfer RNA biogenesis [BR:
sale03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EPH95_08490 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QDI91223
UniProt:
A0A514LH99
LinkDB
All DBs
Position
complement(1758933..1759502)
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AA seq
189 aa
AA seq
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MEAERLHYFLALSVPEDVQKKINELTNLRELAFFTSVTHIRDYHITLFFLGGVVDKELEL
LYKKLPVLVQQIPAFDVQLNQAGVFGKEERPRVLFAGVKRTRPLLDLQAAVAKGCVEAGF
HEEKRPFRPHITIAKRRNQGGTFPMQKVVNETKHWKDIQWRVKEVGLYAVRLGQLPRYEL
KASFPLMQH
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgaacgattgcattactttttggcgctttccgtcccggaggatgtgcagaaa
aagattaatgagcttaccaacttgcgtgaattggccttctttacatccgttacccacatt
cgcgactaccacatcacgcttttttttcttggaggcgttgttgacaaggaactggaactt
ttatataaaaagttgccggtcttagtgcagcaaatccctgctttcgatgtgcagttaaat
caagcaggggtgtttggcaaagaggagcgtccacgggtattattcgcgggcgtcaagcga
actcggccgttgcttgacctgcaggccgcagtggcgaaaggctgtgtcgaagcgggtttt
catgaagaaaaacgaccgtttcgtccgcatattaccatcgcgaaacgcagaaatcaggga
ggaactttcccgatgcaaaaagtcgtgaatgaaacgaaacattggaaagacattcaatgg
cgagtaaaagaagtcggcttatacgctgtccgtttgggacagttgccccggtatgaactt
aaggccagctttccgcttatgcagcattag
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