Silicimonas algicola: EF888_18720
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Entry
EF888_18720 CDS
T05779
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
salo
Silicimonas algicola
Pathway
salo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EF888_18720 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salo03400
]
EF888_18720 (nth)
Enzymes [BR:
salo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EF888_18720 (nth)
DNA repair and recombination proteins [BR:
salo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EF888_18720 (nth)
Prokaryotic type
EF888_18720 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_8
DUF2464
Motif
Other DBs
NCBI-ProteinID:
AZQ68984
UniProt:
A0A316G0E2
LinkDB
All DBs
Position
3791152..3791796
Genome browser
AA seq
214 aa
AA seq
DB search
MARQLPYHTIREIFARFHAAEPEPKGELEHLNAYTLLVAVALSAQATDAGVNKATRALFK
VADTPQKMLDLGEEALTQHIKTIGLYRNKAKNVMKMARILVDDYGGEVPSSRAALQALPG
VGRKTANVVLNMWWSHPAQAVDTHIFRVGNRTGIAPGKDVDAVERAIEDNVPAEYQRHAH
HWLILHGRYICLARKPRCPDCLIRDLCAYEDKTP
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcagcttccctatcacacgatccgcgagatcttcgcccgcttccacgccgcg
gagcccgagccgaaaggcgagctcgagcacctcaacgcctacaccctcctcgtcgccgtg
gcgctgtcggcccaggcgacggacgccggcgtcaacaaggcgacccgggccctcttcaag
gtcgccgacacgccgcagaagatgctcgacctcggcgaagaggctctgacccagcacatc
aagaccatcggcctctatcgcaacaaggcgaagaacgtgatgaagatggcccgcatcctc
gtcgacgactacggcggcgaggtgccttcgtcgcgcgccgccctccaggccttaccaggc
gtcggccgcaagaccgccaacgtcgttctcaacatgtggtggagccaccccgcccaggcc
gtcgacacacacatcttccgcgtcggcaaccgcacaggcattgcacccggcaaggacgtc
gacgccgtcgagcgcgccatcgaggacaacgtgcccgccgaatatcagcgccacgcgcac
cactggctgatcctgcacggccgctacatctgccttgcccgcaaaccccgatgccccgac
tgcctgatccgcgatctctgcgcctacgaggacaagaccccatga
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