Salvelinus sp. IW2-2015 (Arctic char): 111950496
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Entry
111950496 CDS
T05762
Name
(RefSeq) rab GTPase-binding effector protein 1 isoform X1
KO
K12480
Rab GTPase-binding effector protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111950496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111950496
Membrane trafficking [BR:
salp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
111950496
Protein recycling
Rab4 associated proteins
111950496
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rabaptin
Rab5-bind
CENP-F_leu_zip
Fez1
Fib_succ_major
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
111950496
NCBI-ProteinID:
XP_023823884
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All DBs
Position
LG23:complement(18920788..18943831)
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AA seq
876 aa
AA seq
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MADQASGSARQPQHDAVLQQRVAALEQERAEFVKRKQQLESEFNQKRAKFKELYLSKEEE
LKCQAASLEGAQSELSRVQAQLEQAQADMENIKAVATVSESTKQEAIDQVKGQWQEEVAS
LQAIMKDTVREYEVQFHQRLEQERAQWNQYREVVEREMGELRHRLSEGGQEEENLENDMK
KAQEDAEKLRSVVMPMEKEIAALKVKLTVAEDRVKELEASKVKELNHVLEAEKSCRTDLE
MYVAVLNTQKSVLQEDAEKLRKELHEVCHLLELERQQHNQLKHTWQRANDQFLESQRLLM
RDMQRIENVLSSEQLRQVEEIKKRDQEEDEKERISQAKEQNEEDRTETEPLEDSFLGLSI
EEPHSAHGSMHSLDSDLVAGGPMDLYKDGLRRVQSTDSLGSSPSLQGXGGYNHKAKSASH
LDESDFGPLVGADCGAPEGLAGFGDTLSVSSIQLTAGHFLLTKDQEKAIKAMTPEQEETA
SLMSSISHAHDTTFLTPSGYRLVSDQEWNLLQQEVKNAGRKLGRRCDMCSNYEKQLQVIQ
GQEAETRDQVKKLQVMLRQANDQLERTMSEKQELEDSVKQGNEETTAKVAALMQRVQESE
SLLKTLQEAFSQAKRNTQEQMAVLMQSREQVAEELSRLQRDNDSLTGKHRLHLSLQQQED
FKLPTMVQELQALVLQLREDIVVVRTAADHLEEKLKAEILFLKEQLQAEQCFKENLEDTL
QLEIDGCKEEIDILEASLSSLKTELQRVKAEKEQLESSLAEKRKTLASVQGLKSSLEEQL
RELTTTKVRGHSLLRHTRQPVSQETALEAQALDEKDKALRLQTELDVSEQVQRDFVKLSQ
TLQVQLEQIRQADSLDRIRAILNDTNLTDISQLPET
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaggcctcgggatccgcccggcagccccagcatgacgcggtgctccagcag
cgagtggcagccctggagcaggagagagctgagtttgtcaagcgcaaacagcaactggag
tctgagttcaaccagaaacgggccaagttcaaagagctctacctgtccaaagaagaggaa
ctgaagtgccaggcagcgtctctggagggggcccagtcggagctgagtcgtgtacaggcc
cagctggaacaggcccaagctgacatggagaacatcaaggcggtggccactgtgtcagag
agcaccaagcaggaggccattgaccaggtcaagggacagtggcaggaggaggtggcctcc
ctacaggccatcatgaaagacacagtgcgtgagtatgaggtgcagttccaccagcgcctt
gagcaggagcgtgcccaatggaaccagtacagggaggtggtggagagggagatgggcgag
ctgagacaccgcctctctgagggcggccaggaggaggagaacctggagaacgacatgaag
aaggcccaggaagatgcagagaagctacggtcagtggtaatgcctatggagaaggagata
gcagctctgaaagtcaaactgactgtggcagaggacagggtgaaggagctggaggcctcg
aaggtaaaggagctcaatcatgtcctggaagcagagaaatcctgccgcacagacctggag
atgtacgtggcggtgctcaacactcagaagtcagtccttcaggaggacgcagagaaacta
cgaaaagagctccacgaagtgtgtcacctcttggagctggagcggcagcagcacaaccag
ctgaagcacacttggcagcgggccaacgaccagttcctggagtcccagaggctgctgatg
agggacatgcagaggatcgagaacgtgctctcttctgagcagctccggcaggtggaggag
atcaagaagagggaccaggaggaggatgagaaggaaaggatcagccaggccaaggagcag
aacgaggaagacaggacagaaaccgaacctttagaagactcattccttgggctcagtatt
gaagagccccacagtgcccacggctccatgcactccttagactctgacctggtggcaggg
ggccctatggacctctacaaagacggccttcggagggtccagtccacagacagcctgggt
tcctctcctagtctccagggcrtggggggctacaaccataaggccaagtcggccagccac
ctagacgagtccgacttcggacccctggtgggggcggactgcggggcccccgagggcctg
gcgggctttggggacacgctatcggtcagctccatccagctgacggccggccacttcctg
ctcaccaaggaccaggagaaggctataaaggccatgacgccggagcaggaggagacggcc
tcgctgatgtccagcatctcccacgcccacgacaccaccttcctgaccccgtcaggctac
cgcctggtcagtgaccaggagtggaacctgctgcagcaagaggtgaagaacgcaggaagg
aagttgggacggcggtgtgacatgtgctctaactacgaaaaacagctgcaggtcatccag
ggccaggaggcagagacacgcgatcaggtaaagaagctccaggtgatgctgcggcaggcc
aacgaccagctggagagaaccatgagtgaaaaacaggagttggaggactctgtgaaacag
ggcaacgaggaaaccactgcaaaggtcgctgctctcatgcagagagtccaggagtccgag
tcactgcttaaaacactacaagaggccttcagtcaggccaagcggaacacacaggaacag
atggctgtgctgatgcagtccagggagcaggttgctgaggaactgagcagactgcagagg
gacaacgacagcctaacaggcaaacacagactccacttatctctccagcagcaggaggac
ttcaaactacccaccatggtgcaagaactacaagccctggtgctgcagttgcgggaggac
atagttgtggtgcgcacggctgcagaccacctggaagagaagctgaaggcggagatcctg
ttcctgaaggagcagctccaggcagagcagtgcttcaaagagaacctggaggacacacta
cagctggagatagatggctgcaaggaggagatagacatcttggaagcgtcattatccagt
ctgaaaactgagctgcagcgagtgaaagccgagaaagaacagctggagagcagcctggca
gaaaagaggaagacattagcgagtgtccagggtctgaagagcagtctggaggagcagctc
agagagctcaccacaaccaaggtcagaggtcattcactgctcagacataccagacagcct
gtatcacaggagacggcccttgaggctcaggcgttggatgagaaggacaaagccctacgg
ttgcagacggagctggatgttagtgagcaggtgcagagggactttgtcaagctctcccag
acactccaggtccagttggagcagatcagacaggctgactctttagaccgtatccgagcc
atcctcaacgacaccaacttgactgacatcagccagctcccagagacatga
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