Salvelinus sp. IW2-2015 (Arctic char): 111952222
Help
Entry
111952222 CDS
T05762
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
111952222
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111952222
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111952222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
111952222
NCBI-ProteinID:
XP_023826540
LinkDB
All DBs
Position
LG26:complement(38797462..38836378)
Genome browser
AA seq
841 aa
AA seq
DB search
MDQMIRQVPLHHRPPTRTSSPSSPNSTLEMPNVPSYPQLPPISLSRQLSGLFNPTFHIED
DPTSARPSASSRLSVHPAVNVEDVDSGGGGHHRHIRQILTPQDPNLKTLTVPRVSKASRQ
SKVADKEKNLHSQSEDDDEEETETAVRAWPSQSSILSGDDGLKERPASSASQASYVVNER
LQELVKMFKERTERAKEKLIDPDDSDDDSPTASPVRAPTPPPAPPEEPEEEAQPASPERE
MEEQQPQSRLCCKVTPPRWIRALLHYRFPSSIDPFTNLVYVLWLFFVTLAWNWNVWLIPM
RWAFPYQTPSNIYLWLLADYLCDLIYILDIMVFQPRLQFVRGGDIVFDRKDMRKNYMKTF
RFKMDVVSLVPLELFYFKTGINPLLRFPRLLKVMSFFEFNDRLEAILTKAYVYRVIRTTT
YLLYCLHCNACLFYWISAYEGLGSTKWVYDGKGNSYIRCYYFAVKTLITIGGLPEPTTLF
EIIFQLINYFVGVFAFSIMIGQMRDVVGAATSGQTYYRACMDNTVKYMASYRIPKDVQNR
VKTWYNYTWQSQGMLDEQELLVQLPDKMRLDIAVDVNYDIVSKVSLFQGCDRQMIFDMLK
SLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKTVFVTLKSGSVFGEISLLAV
GGGNRRTANVVAHGFTNLFILDKKDLNEILVHYPESQKLLRKKARNMLTKDKKPQEPPKE
PAQVIPPRTETPKLLKAALEMARQKTGLKGTLAKIKENTNISSISLQPSMSSSLTPLSPV
SPVSSLDPERKSGIMSPTSDSSTLLRPASHCHRGETLSKEQGNVVEEEAGESGKRKEKRK
P
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggaccagatgatccgccaggtccccctccaccaccgccccccgacccgcacctcctcc
ccgtcctcccccaatagtaccctggagatgcccaacgtgccctcctacccccaactgccc
cccatcagcctgtccaggcagctgtcagggcttttcaaccccaccttccacatcgaggac
gaccccacgtccgctcggccctcagcgagctccaggctcagtgtgcaccctgctgtcaac
gtggaggatgtggattcaggcggaggggggcaccatcgacacattcgccaaatcctcacc
ccccaggaccccaacctcaagaccctgaccgtacccagagtgtcaaaagccagccgccag
agcaaagttgctgataaagaaaagaacctgcactctcagagtgaggatgatgatgaagag
gagactgagaccgcagtgagggcgtggcctagccagtccagcatcctcagtggagacgat
gggctgaaggagcggcctgcgtcgtccgctagccaggccagctacgtggtgaacgagcgc
ctacaggagctggtcaagatgtttaaggagaggacagagagggccaaagagaaactcata
gacccagatgactctgatgatgacagtcccactgcctcccctgtgagagctccaacacct
cctcctgcacctccagaggagccggaggaggaagcacaaccagcttcccctgagagggag
atggaggagcagcaaccccagtctagactgtgctgcaaggtgacgcctcctcgctggatc
agagccctgcttcactaccgcttcccctctagcatcgaccccttcaccaatctggtctat
gtgctgtggctatttttcgtcaccttggcgtggaactggaacgtgtggctgatcccgatg
cgctgggccttcccctaccagacccctagtaacatctacctgtggctgctagccgactac
ctgtgtgacctcatctacatcctggacatcatggtcttccagccccgcctgcagtttgtc
cgcggtggcgacatagtgtttgacagaaaggacatgcgaaagaattacatgaaaactttc
cggttcaagatggatgtcgtcagtcttgtgccactggaattgttctattttaaaactggg
atcaacccactcctccgcttcccacggctactaaaggtaatgtctttcttcgagttcaac
gaccgtctcgaggccatcctgaccaaagcctatgtttacagagtgatccggaccaccacc
tacctgctgtactgcctccactgcaacgcctgtctgttctactggatctctgcgtatgaa
ggtctgggctccacgaagtgggtctatgatgggaagggcaacagttacatccgctgctac
tactttgctgtgaagactctgatcaccattggtggactgccggagcccacaacgctcttt
gaaatcatctttcagctcatcaactactttgtaggagtgtttgccttttccatcatgata
ggacagatgagagatgtggttggtgcagccacttccggacagacgtactacagagcatgc
atggacaacactgtcaaatacatggcctcctaccgtatccccaaagacgtgcaaaaccgg
gtcaaaacctggtacaactacacctggcagtcccagggcatgctggatgaacaggagctt
ctggtccagctcccagacaagatgaggctggacatcgctgtagatgtcaactatgacatt
gtcagtaaagtctctctcttccagggttgcgacagacagatgatctttgacatgttaaag
agtctgaggtctgttgtttacctcccgggggactatgtctgcaaaaagggcgaggtcgga
cgggagatgtacatcatcaaggccggggaggtgcaggtggtgggcgggccagacgggaag
accgtgtttgtcacactgaagtcggggtcagtgtttggggaaatcagcttgcttgcagtg
ggtggaggaaacaggagaacagccaacgtagtggctcatggcttcaccaacctgttcatc
ctggacaagaaggacctcaatgagattttagtgcattaccccgagtctcagaagctgctc
cgcaagaaggcaaggaatatgctgacaaaagacaagaagcctcaggagcctccgaaggag
ccggcccaggtgatccctcctcggacagagacacccaagctacttaaagctgctctggag
atggctcgtcagaaaacaggcctcaaagggacccttgcaaagattaaggagaacaccaac
atatccagtatttcgcttcagccctcaatgtcctcctccctgacccccctgtccccagtc
tctccagtctccagtctggacccagagcgcaagtctggcatcatgtccccaacctcagac
agctccacgttgctccgccccgcctcccattgtcacagaggtgagacgctgtccaaggag
cagggcaacgtggtggaagaagaggcaggagagagtgggaagaggaaagaaaagagaaag
ccatga
DBGET
integrated database retrieval system
