Salvelinus sp. IW2-2015 (Arctic char): 111955662
Help
Entry
111955662 CDS
T05762
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111955662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111955662
03021 Transcription machinery [BR:
salp03021
]
111955662
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
111955662
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
111955662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
111955662
NCBI-ProteinID:
XP_023831674
LinkDB
All DBs
Position
LG31:complement(9250951..9323338)
Genome browser
AA seq
687 aa
AA seq
DB search
MFVPLPVPFVFQRTASDFSAWRLKSPLALRSSSDIRMSKPAEDEKPGADFPGESTDSERN
SPDANDQVQPMKTSPFSLSPTLSSINSKGEAVPEMISTHVPPPXQQQTPHPHTQLMLAGS
QLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAHAAAQANQQQQQQQLTKQE
QAPPQLTLSQPIQLTAQDIQQLLQLQQLVLMPGHHLQSPQFLLPQAQGQQGQQGKWDLLS
LLSTPNLIPLPQHQQSQGSLLTTPPRLGLQAQXRHGDGLSSLQRDKSGDGGVTSGASAAP
MTSVTSGPHGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLYGNDFSQTTISRF
EALNLSFKNMCKLKPLLEKWLNDAETMAIDSMLPSPNSLSSPMMGFEGMPGRRRKKRTSI
ETNVRVALERNFILNQKPNSEEILLMGQQLNMEKEVIRVWFCNRRQKEKRINPCSATPPL
PSQSPSMMHKPPCYSPHMVSSHGLHQAATSLSTTVTSPLPLVTCPLTPCGSAATSSTPSS
RTPPPHSTASPAPPTLSTHSLNAGNTMMGVSTGMNQALVSSNHLATMQALAASGGQLPIS
SLEAGGQMILGGAGVRPSLFLNRHTLLPMASHQAGVGLVGGPRGASPPPGASGMDVDSCS
ASPCSSXASFGSFSEASPPPLGGAMAE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcgtctttcagagaactgcttccgacttcagcgcc
tggcgtctcaagtccccgctggctctacgctccagctccgatatcaggatgtcaaaacca
gcagaggatgagaagcctggggcagactttccaggggagagcacagactccgagaggaac
agtcctgatgccaatgatcaggttcagccaatgaaaacgagtcccttcagtctttctcct
accttgagcagcatcaayagtaaaggtgaggcagtacctgagatgatctccacccatgtg
ccgcctccttsccagcagcagacgcctcaccctcacacacaactcatgttggcagggagt
cagctggcagggctggctgccctcttgcctgcgcagcagcagctgttgcttcagcaggcc
caggctcagctcctggccgccgccgtgcagcagtccaacgcggctcacgctgctcatgcc
gcccacgcagccgcccaagccaatcagcagcagcagcaacaacagctgaccaaacaggag
caagccccgccccagctcaccctctctcagcctatccagctcaccgcccaggatatccag
cagctgttgcagttgcagcagttagtcctgatgcccggccaccacctgcagtctcctcag
ttcctcctgcctcaggcccagggacaacaggggcagcagggtaagtgggacctactaagt
ttgctctcgacacctaatttaattccgctacctcagcatcagcaaagccaggggagtctt
ctaactactccacccaggctgggactgcaagcacagrgtcgccatggtgacggcctctca
tcattacagagggacaagagcggggacggcggggtgacctccggagcctcggcagccccc
atgacctcggtgacctctggccctcacggcgaggagcccagtgacctggaggagctggag
cagttcgcccgcaccttcaaacagagacgcatcaaactgggcttcacacagggtgacgta
ggcatggcgatggggaaactgtatgggaatgacttcagccagaccaccatctctcgcttc
gaggccctaaacctgagctttaagaacatgtgcaagctcaagcctctgcttgagaagtgg
ctaaacgacgcggagaccatggcgatagacagcatgcttcccagcccaaactctctctcc
tcccccatgatgggatttgagggcatgccggggcgccgcaggaagaaacgcaccagcatt
gagaccaacgtccgcgtggccttagagcgcaacttcatcttgaaccagaagcctaactca
gaggagattctcctgatgggccagcagctcaacatggagaaggaggtgattcgggtctgg
ttctgcaaccggcgccagaaagagaagcgcatcaacccttgcagtgccacccctcccctg
cccagccagtccccctccatgatgcacaaacccccctgctacagcccgcacatggtgtcc
agtcacgggctgcaccaggctgccaccagcctcagcacaacagtgaccagtccattaccc
ttggtgacctgccctctgaccccctgtggctctgcagccaccagctccaccccctcctct
aggactccgcctccacacagcacagccagccccgctcctcccaccctcagtacccacagc
ctgaacgctgggaacacaatgatgggagtaagcacagggatgaaccaggctctcgtcagc
agcaatcacctggccacaatgcaagctctggctgccagtggtgggcagctgcccatttcc
agtcttgaggccggaggtcagatgatcctgggcggggctggggttcgcccctccctattc
ctcaaccgccacaccctcctgcctatggcgtcccaccaagccggtgtgggtttggtcggc
ggtcccaggggagcctctccaccccccggcgccagcggcatggacgtcgactcctgctcc
gcctctccctgctccagckccgcctccttcggctcgttcagcgaagcctcaccgccgccg
cttggcggggccatggccgagtga
DBGET
integrated database retrieval system
