Salvelinus sp. IW2-2015 (Arctic char): 111957041
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Entry
111957041 CDS
T05762
Name
(RefSeq) semaphorin-4E
KO
K06521
semaphorin 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
salp04090
]
111957041
CD molecules [BR:
salp04090
]
Proteins
111957041
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Ig_2
ig
Ig_3
I-set
Ribosomal_L3
Motif
Other DBs
NCBI-GeneID:
111957041
NCBI-ProteinID:
XP_023833523
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Position
LG32:34898695..34906943
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AA seq
779 aa
AA seq
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MYPLVVVSFFWHLPLTLTLDAHSPLDCVPRKTVPYHRENGRMFGEEGVWNYSTMLLREDL
GLLLLGARENIYALDINNISNKKSSVSWKVTEKQQKECSSKGKNQIECQNYIRVLHTMED
GRMYVCGTNAFNPECDYMSYKDGELTLENKAEDGKGKCPFDPFQRFSSVMIDKTLYSATS
MNFLGSEPVVMRSSPSSIRTEFKSSWLHEPNFISMAQMPESRNSLTGDDDKVYLFFTETA
VEYDFYSKLVVSRVARVCKGDLGGQRTLQKKWTSFLKARVDCPVLESQLPYIIQDTYRWC
EEGDWRSCVFYAVFTSQSDRVDLSAVCAYRVLDIGRVFSEGKYKTPVTVETSFVKWVMYS
GDVPSPRPGACINDEARNQGISQTLDLPDRTLQFIRDRPLMDQAVLPMGERPLLVRRGTA
FTRIIVHRTQALDRKKYHVMFIGTEGGSVLKAVNYDKEMFIIEEVQLFQPREPIKVLRFS
NTTGQLYAGSEYGAVQMPFSSCGRSHTCVDCVLARDPYCVWDRTTAQCIALSTANTDSEL
IQSLWAGDFSLCPASDPVKTVNQTVWLGGNVKLQCPPTSNLAETHWVQDSLPLPSSPRNQ
ILRDSLLILNASASDTGRYRCLSMERSHSGKYTTTVAEYQLRVGLEGLPLRPEARTESPS
LAALQVSVAFLAILLAVLLGWNLYKGHLPLPGPCGRVIGAGRGQNQGAPEGAAHIAVAHL
EVSEPGEAESKALMSGEGNCTSNNNHSTGEVALGVGEEGESEASVTFPSLQFIDDESEI
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtatcctctagtggtcgtaagtttcttttggcacctccctctcactctgacgctggat
gcccattcgccactggactgcgttccgcgtaaaactgtaccctatcatagagagaatggt
cgtatgttcggtgaagagggtgtgtggaactactccaccatgctgctgagagaggacctg
ggtctgttgctgctgggagccagagagaacatctatgccctggacatcaacaacatctcc
aacaagaagtcctcygtaagttggaaagtgacagagaagcagcagaaggagtgyagctcc
aaagggaaaaatcagatagagtgccagaactacatcagggtcctgcatacgatggaggat
ggtaggatgtatgtrtgtgggaccaatgccttcaacccagagtgtgactacatgtcgtac
aaagacggagagttgactctggaaaataaggcagaggatggcaaagggaagtgtcccttc
gatccattccagagattttcttccgtcatgatcgacaaaaccctctactcagccacctca
atgaacttcctgggttctgagcctgtggtgatgcgcagctctccctcctccatacgcact
gagttcaagagctcctggctacacgagcccaacttcatctccatggcccagatgccagag
agtaggaacagcttaacgggtgacgatgacaaggtctacctgttcttcactgagaccgct
gtggagtacgacttctacagcaaactggtggtgtcccgcgtagcacgtgtctgcaagggg
gaccttgggggccagaggaccctgcagaagaagtggacgtcgtttctaaaggcccgtgtg
gactgtcctgttctggagtcccagctaccctacattatacaggacacctaccgctggtgt
gaggagggagactggagaagctgtgtgttctatgctgtattcacatcacagtcggacagg
gtggacctctctgcagtgtgtgcatacagggtgttggacatcggcagggtgttctccgag
gggaagtacaagaccccggtaaccgtggaaacgtcctttgtgaagtgggtgatgtacagc
ggtgacgtgccctcccccagacctggagcttgtatcaatgacgaggctcgtaaccagggc
atcagtcaaactctggacctgccagaccggaccttgcagttcattagagaccggcccctc
atggaccaggctgttttgcccatgggagagcgccccttgctggtcaggagaggcactgcc
ttcacacgcatcatagtacacagaacacaggccctggacaggaagaaataccatgtcatg
ttcataggcacagagggtggcagcgtgttgaaagcggttaactacgataaggagatgttc
atcatcgaggaagtgcagctcttccagccccgtgagccaatcaaagtcctccgtttctcc
aacacaacgggtcagctgtacgcaggctctgagtacggtgctgttcagatgccgtttagt
agctgtggtcgttctcacacctgtgtggactgtgtcctggccagagacccttactgtgtc
tgggacagaactacagcccaatgtatcgccctgtctacagctaacacagacagtgaactg
atccaaagtttatgggctggagacttctctctctgccccgcctcagaccctgtgaagact
gttaatcagaccgtgtggctgggtggcaacgtgaagctccagtgcccccccacttccaac
ctggcagagacccactgggtgcaagactccctgcccctgccctcctcgccccgcaaccag
atcctccgagacagcctccttatcctcaacgcctctgcctctgacactggccgctaccgc
tgtctgtccatggagcgttcccacagcgggaagtacaccaccaccgtggctgagtaccag
cttagagtaggtctagaagggctcccactcagacctgaagcccggactgagagcccttcc
ctggcagcgctgcaggtgtcagtggccttcctggcgattctgctggctgtcctgctgggg
tggaacctgtacaagggacatctgcccctgcctgggccctgtgggagagtgataggagca
gggagagggcagaaccaaggtgccccagagggggctgctcacattgccgtggcccaccta
gaggtctcagagcctggggaggcggagagcaaggccctgatgtctggagaaggaaactgc
accagtaataacaaccactctactggggaggtggcattaggagtgggtgaggagggggag
agtgaagccagtgttactttcccctcattgcagttcattgatgatgaatcagagatatga
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