Salvelinus sp. IW2-2015 (Arctic char): 111957289
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Entry
111957289 CDS
T05762
Name
(RefSeq) phakinin-like isoform X1
KO
K10379
phakinin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111957289
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Others
111957289
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Gene cluster
GFIT
Motif
Pfam:
Filament
CCDC22_CC
PUMA_CC
Sec8_N
AAA_13
ATG17_like
DUF5798
FKBP15
Alpha-2-MRAP_C
TPR_MLP1_2
TolA_bind_tri
ANC1_spectrin
Laminin_II
Motif
Other DBs
NCBI-GeneID:
111957289
NCBI-ProteinID:
XP_023833850
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Position
LG32:complement(3381101..3387254)
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AA seq
439 aa
AA seq
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MPLPRRRSSFLGQPSAAERPGSASTRAGTACITTAPRGVFVGTAPTGGTSSLGTRVSRRA
LGISSVFLQGLRSTAVPVMPRGAGAGGRQHPGGAESLNGCLMEYRDKVHALELLNQQLEE
QIRHCLDRKASSAGAWGPLRQDWEDVYRQVSESILDNARLMLQTENVQANAEDFKDRYEN
EQPFRKAVEEEISSLYKVIDDANLTKSDLESQMDSMRAELRDLARNHEEDVRVLYNQMAG
REVDEPDAPIETNLDQILAYIRSHWERVIEKNRAETDAYLEYKQEESVGSKLSHEEEELE
SLKTEYNDAGCKIQSLQAETESIRALKRGLENSLNDAKHWHDIELQNLGSVIGKLESELG
DVRGDIEQQRRDYETLLGNKMRLELEIGTYHGILDGEESRYHPSMCTGASEPKGRQTPLP
PHSEPRGGPAPQGSNTSSY
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgccaagacgtcgatcctccttcttgggccagccctccgctgcagagcgcccg
ggtagcgccagcaccagggctggcaccgcgtgcatcaccacagccccccggggcgtcttt
gtggggacagcccccacgggcggcacctccagtctgggcacacgcgtgtcgcggcgtgcc
ctgggcatcagcagtgtgttcctgcaggggctgaggagcacggctgtgcctgttatgcca
cgtggggctggggctggtggcaggcagcaccccgggggtgctgagagccttaacggctgc
ctgatggagtacagggacaaggtgcacgccctggagctgctcaaccagcagctggaggag
cagatcagacactgcctggatcgtaaggcgtccagtgccggagcctggggtcccctcaga
caggactgggaggacgtctacaggcaggttagtgagtccatccttgacaatgccaggcta
atgctgcagacagagaatgtgcaggccaacgctgaggacttcaaggaccgctatgagaat
gagcagcccttcaggaaagcggtggaggaggagatcagctctctgtacaaggtgattgac
gacgccaacctgaccaagtcagacctggagagccagatggacagcatgagggctgagctc
cgagacctggcccgcaaccacgaggaggacgtgagggtgctctacaaccagatggcaggc
cgtgaggtggacgagccggacgctcccattgagaccaatctggaccagatactggcctac
atccgctcccactgggaaagagtcatcgagaagaaccgtgccgagactgatgcctacctg
gaatacaagcaggaggagagtgtgggcagtaagctgagtcatgaggaggaggagctggag
agtctgaagacggagtataacgacgctggttgtaaaatccagagtctgcaggccgaaacc
gagtccatcagagcactgaagcgcggtctggagaactccctgaacgatgccaagcattgg
catgacatcgagctgcagaatctgggatccgtcattggcaagctggagtcagagctgggc
gacgtccgcggcgacattgaacagcaacgccgtgactatgagacgttgctaggcaacaaa
atgcgcctggagctggagatcggcacctaccacggcatcttggatggggaggagagccgc
taccacccctcgatgtgcacaggtgcatcagagcctaaggggagacaaactccccttcct
ccccattcggagccccgcggcggcccagcacctcaaggttccaacacatctagttactag
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