Salvelinus sp. IW2-2015 (Arctic char): 111958673
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Entry
111958673 CDS
T05762
Name
(RefSeq) PHD finger protein 1-like
KO
K11467
PHD finger protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111958673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111958673
03036 Chromosome and associated proteins [BR:
salp03036
]
111958673
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
111958673
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111958673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
Chromo
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
111958673
NCBI-ProteinID:
XP_023835692
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All DBs
Position
LG35:complement(8975982..8991361)
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AA seq
519 aa
AA seq
DB search
MSSRHRNRCDPNGEEFDLTGRWSQACCLAEIGTNFGILGLRKDIHSFSVGVEEVCCVCDA
PPLKEPLINCLKCRHGYHPECHTPSIEPEADSNSWICRQCVFAVATKRGGAIKRGRFARL
MQIMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFHEACTQCL
TKPLLYGDRFYEFQCSVCASGPETIQRLPMSWVDLAHLVLYHLSLCCKRKYFDFDHEIMS
FANENWDSLLLGSLSDTPRQDRCHNLLNALNSNKDRFVSGKEIKKKKCLFGLQVRAPPPL
TSDSSPLITDPPINITQRRRSDPLSLPCQRRAAGPESRKSKRRIMETQPCPPPVPATPID
LVPCCHGYVGGTNLYNSRKSEEELNLGSPPKRMFALYHPTYNGAPAISRTLHHYSAEDPC
RVPPPCLPFSLSSSHHHNHHHHNNHHHQQHQPGQKLDPCPSLLLRDVPSYPGGVGGGGGG
DGSAARGWGGGDGVRILARRVTPDGKVQYLVEWGNVSVY
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagccggcacaggaatcgctgtgaccccaacggagaggagttcgacttgacaggt
agatggagtcaagcatgttgtctggctgagattgggacaaacttcggaattctgggtcta
agaaaagacattcattctttctcagttggagtggaagaggtttgctgtgtttgtgatgcc
ccgcctcttaaagaacctctcatcaattgtcttaaatgtcgtcacggttatcatcctgag
tgccacactccgtccattgagccggaagctgacagcaattcttggatatgtcggcaatgt
gtctttgcagtggcgaccaagagagggggagccatcaaacgaggacggtttgcccggctc
atgcaaatcatgaaacttcggctgccctatcagctgtcatctttagactgggacccacag
catctgaccaaccagcagcagtgttactgctactgtgccggacctggagagtggaacttg
aaaatgttgcagtgtggaagttgtggtcagtggtttcatgaagcttgcacacagtgtctg
accaagccgttgttatatggagacaggttttatgagttccagtgctcagtctgtgcaagc
ggaccagagacaattcaacggctacccatgagctgggtagatttggcccatttggtgctc
taccacctctccttgtgctgcaagagaaaatactttgatttcgaccatgaaatcatgtcg
tttgccaatgagaattgggactctttgcttctaggctcgctctctgacacaccaaggcaa
gatcgctgccacaatctgctcaacgctttgaactccaacaaagacaggtttgtctctggt
aaagagatcaagaagaagaagtgtctttttgggctccaggtccgagctccgcctcccctg
acctctgattcgtctcccctcatcactgacccgcccatcaacatcacccaaaggagaagg
tcagacccattgtcactgccctgccagaggagagcggcggggccagagtcacgcaaatca
aagcggcgcatcatggagacacagccttgtccgcccccggtcccagccaccccaatagat
cttgtgccatgttgccatggctacgtaggtggaactaacctctacaactccaggaagtcg
gaggaggagctgaatttgggctctccacctaagcggatgtttgccctgtatcaccccacc
tataacggagccccagccatctccagaaccctgcatcactatagtgcggaagatccttgt
agagtgccgcccccctgcctccccttttccctgtcatcctcccaccatcacaaccaccac
caccacaacaaccaccaccaccagcagcaccagcctggccagaagttggatccctgcccc
tccctcctgctgcgtgacgtcccttcctatccgggcggcgtggggggagggggtgggggg
gatgggtcagctgccaggggctgggggggcggggacggggtgaggattttggcgaggcga
gtaacgccagacgggaaggtccagtacctcgtggagtgggggaacgtgagtgtgtactga
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