Salvelinus sp. IW2-2015 (Arctic char): 111959748
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Entry
111959748 CDS
T05762
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111959748
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
111959748
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
IQ
GPHH
PFF1_TM
FraC
ATP-synt_B
New_glue
Motif
Other DBs
NCBI-GeneID:
111959748
NCBI-ProteinID:
XP_023837304
LinkDB
All DBs
Position
LG36:10707659..10754582
Genome browser
AA seq
1991 aa
AA seq
DB search
MAQLLVPPGPDSFLLFCRESLDAIERRIAEENAKKPKGKPNDDDDNGPKPSSDLEAGKSL
PLIYGDIPKGLVSTPLEDLDTFYSNQKTFIVLNRGKAIFRFNATPALYVLSPFNPLRRIS
IKVLVHSLFSMVIMFTILTNCAFMTLSQPPDWAKNIEYTFTGIYTFESLIKILARGFCVG
KFTFLRDPWNWLDFCVIVMAYVTSFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI
QSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRNKCLRIRPNSTNLLNDTLDFNGKEYND
ADFNETVPFNWTNYTNNPDNYYYLPGKRDALLCGNGSGAGLCPEGFWCVKAGRNPDYGYT
SFDTFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVA
MAYDEQNQATMEEAQKKEEEFQAMLEQLRRQQEDAQAAATVMAAESGEFSERGDLTETSS
EASKLSSKSAKERRNRRKKRKQREEEEREDNDKCHRSESESSMKKSHFRFSMDASNLHNY
DMSCSTPYQSFLSIRGPLFSSRRNSRASLYSFRDRARDIGSENDFADDENSTFEDNDSRR
GSLFVPRRSDRRSSNVSQNSMPSHVLLPANGKMHSSVDCNGVVSLVGGASLPRSPEGLLL
PEENPTETEYRTARYGSYQASMDFLEDPVARQRALSVASVITNTMEELEESRQKCPPCWY
KFANTFLIWDCCPKWLRIKKIVNMIVMDPFVDLAITICIVMNTVFMAMEHYPMSGEFNTM
LYVGNLVFTGIFTAEMCFKIIALDPYIYFQEGWNIFDGIIVSLSLMELGLANVSGMSVLR
SFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDC
VCKISTDCTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFLMVMVIG
NLVVLNLFLALLLSSFSADNLAATDDDSEMNNLTVAIGRIHQGIAFVKALVRRSFQSICL
RKKKRSLNEDKTLDDLHKTMGTNWNSNHTTVEIMKDPDYIKGGNGATSGLGVGVGSNAAG
KYIMNDNTDYMPFIHNASLTVTVPIAVGESDLNTEDFSSDSSDIEESKEQLSEDHPLSSS
EGSTVDIRPPGEGEGSVDMEPEESMEPEGCFTDGCVRRFQCCQVNVDEAKWKMWWTLRKT
CFRIVEHNWFESFIIFMILLSSGALAFEDIYIEKRKTIKTVLEFADKVFTYIFILEMLLK
WVAYGFAKYFTNAWCWLDFLIVDVSLVSLVANALGYAELSAIKSLRTLRALRPLRALSRF
EGMRVVVNALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNITTQERFKVRDV
ANKTECLALEGAYWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLEDQPDYE
VNLYMYMYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKL
GSKKPQKPIPRPANKFQGYVFDFITKQAFDIVIMILICLNMVTMMVETDDQTDDMDGILY
KINLVFIVMFTGECVLKMFSLRQYYFTIGWNVFDFIVVILSIIGMFLSELIEKYFVSPTL
FRVIRLARIGRILRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAY
VRKESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNKREPDCDSRKEHPGSKYKG
GDCGNPLVAIIFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWE
KFDARATQFMEYEKLSDFADALDPPLRISKPNKIQLIYMDLPMVSGERIHCLDILFAFTK
RVLGEGEGLDILRGQMEERFMASNPSKVSYEPITTTLRRKQEDMSALVIQRAFRRYLLRR
IVKRASAMYKEKMLLDKEVLVIDKFNEISTSDRTDMTSSTASPPSYDSVTKPEKNKYEKD
KREKEVKKKKK
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgccaggaccagacagcttcctcctgttttgtcgtgagtcc
cttgatgccatcgagaggcggatcgctgaggagaacgccaagaaacccaaggggaagccc
aatgacgatgacgacaacggacccaagcccagcagtgacctggaggcaggcaaatcactg
ccactcatatacggggacattcccaaaggattggtgtccacaccactggaggacctggac
accttctacagcaatcagaaaacctttatagtgttgaaccgagggaaggccatcttccgc
ttcaacgccactcctgccttgtatgtcttaagccccttcaaccctcttagaagaatatca
attaaggttttggttcactcattgttcagcatggtaatcatgttcactatccttaccaac
tgtgcgtttatgaccctgagtcagcctccagactgggcaaagaatatagagtacacattc
actggaatttatacatttgaatcgcttataaaaatattggcaaggggcttctgtgtcggg
aagttcacctttctccgagacccatggaactggttggatttctgtgtcattgtcatggca
tatgtcacatcgtttgtggacctgggcaatgtgtcagcactgagaacgttcagggttctc
cgagcactgaaaactatatcggtcatcccaggcctgaagaccattgtgggagcgctgatc
cagtcagtgaagaaactgtcagacgtgatgatcctcactgtattctgcctaagtgtcttt
gccctagtagggctgcagctgttcatgggcaatttaagaaacaaatgtttaaggatccgt
cctaactcaaccaacctcttgaatgatacattggactttaatgggaaggagtataatgat
gcagactttaacgagaccgtcccgttcaactggaccaattacactaataatcctgataat
tattactacctcccaggtaaaagggatgctttgctttgtggaaatggcagtggtgctggg
ctgtgtccagagggattctggtgcgtcaaagcgggccggaacccagactacggctacacc
agctttgacacgttcagctgggccttcctgtctctgttcagactgatgactcaggactac
tgggagaacctctaccagcagaccctgcgggctgctgggaagccgtatatgatcttcttt
gtgctggtcatcttcctgggctccttctacctgatcaacctgatcctggctgtggttgcc
atggcgtacgacgagcagaaccaggccaccatggaggaggctcagaagaaggaggaggag
ttccaagccatgctggagcagctgaggagacagcaggaggatgcacaggcggcggcaacg
gtgatggcagctgagagtggggaattcagtgagagaggggacctcactgagacctcctca
gaggcctccaaactcagctccaagagcgccaaagagaggcgcaacaggcgcaagaagagg
aagcagagggaggaggaggagagagaggacaatgacaagtgtcacaggtctgagtccgaa
agcagtatgaaaaagagtcacttccgcttctccatggatgcctctaacctgcacaactat
gacatgagctgttcaacaccataccagtccttcctgagtatccgcggacccctgttctcg
tccagacggaacagccgggctagcctctacagcttccgggaccgtgcgcgggacataggc
tcggagaacgactttgccgacgacgagaacagcactttcgaggacaacgacagtcgccgg
ggctctctgtttgtccctcggcggagcgaccggcgctccagtaacgtgagccagaacagc
atgccatcacacgtcctgctgccagcaaatgggaagatgcacagctccgtcgactgcaac
ggggtggtgtccctagtgggcggggcttcactccccaggtcacctgagggactccttctg
ccagaggaaaacccgacggagacagagtatagaacggcccgatatggatcgtaccaggcc
tctatggacttcctggaagaccccgttgccagacagagggcgctcagtgtagctagtgtt
ataaccaacactatggaagaacttgaagaatcgagacagaagtgccctccttgctggtac
aagtttgccaacaccttcctcatctgggactgttgtccgaagtggctgaggatcaagaaa
atagtcaatatgatcgtgatggacccgtttgtagacctagctatcaccatatgtattgtt
atgaacacagtgttcatggctatggagcattacccaatgtctggggagttcaacaccatg
ctttatgtgggaaacctggtgttcacaggtatcttcacagctgagatgtgtttcaagatt
attgctttggatccatacatttattttcaggaaggctggaatatatttgatggtatcatt
gtcagtttgagcttgatggagcttggcttggccaacgtgtctggaatgtctgtcctcaga
tcattccgattgctgagagtattcaaactggccaagtcttggcctacactgaacatgctg
atcaagatcattggtaactcagtgggggctctgggtaatctcaccctcgtactggccatc
attgtcttcatcttcgccgtggtgggcatgcagctttttgggaagagctacagagactgt
gtgtgtaagatctctacagactgcacactgccccgctggcacatgcatgacttcttccac
tccttcctgattgtgttccgggtgctgtgtggggagtggatcgagaccatgtgggactgt
atggaggtggctggtcagagcatgtgtctcatcgtcttcctgatggtcatggtcatcggg
aacctagtggtcctgaatctgttcctggccttgctgctgagctcgttcagtgctgataac
ctggcggccacggatgatgacagcgagatgaacaatctgacggtggccataggccgcatc
caccagggcatcgccttcgtcaaggccttggtgcgccgctctttccaaagcatctgtctg
aggaagaagaagaggagcctgaacgaggacaagaccctggatgacctccacaaaaccatg
gggaccaactggaactccaaccacaccactgtggagatcatgaaagaccccgattacata
aagggtggcaatggcgccaccagtgggttgggagtgggggtgggcagcaatgcagcaggg
aagtacataatgaatgacaacactgactatatgccgttcatccacaacgccagcctgacc
gtcacggtgcccatcgctgtgggagagtcggacctcaacactgaggacttcagcagcgat
tcctcggacatagaggaaagcaaagagcagctatctgaagaccatccgctgagctcctca
gagggcagtacagtggacattaggcccccaggagagggagagggctcggtggacatggag
cctgaggagtccatggaacctgaaggctgcttcactgatggatgtgtccgcagattccaa
tgctgccaagtgaacgttgatgaggccaagtggaagatgtggtggacgttgagaaaaact
tgttttaggatagtggagcacaactggtttgagagctttatcatcttcatgatcctgctc
agcagtggagcgctggcatttgaggacatctacatcgagaagaggaagactattaagact
gtgttggagtttgcagacaaagtcttcacctacatcttcatcctggagatgttgctgaag
tgggtggcctatggattcgccaaatacttcaccaacgcttggtgctggctggacttcctc
attgtcgacgtgtctcttgtcagccttgtggccaatgccctgggctacgctgagctgagt
gccatcaagtccctgaggactctacgagcactgaggcccctgagagcgctgtcccgcttc
gagggcatgagggtggtggtcaacgctctgctcggagccatcccctccatcttcaatgtg
ctgctggtctgcctcatcttctggctcatcttcagtatcatgggcgtcaacctgtttgca
gggaaatactaccattgtgtcaacatcaccacacaggagcgcttcaaagtcagagacgta
gctaacaagacagaatgtttggctttggaaggtgcctactggaagaatgtgaagatcaac
tttgataatgtgggggcaggatatctggcactgttacaagtggctacattcaaaggctgg
atggacatcatgtatgcagctgtggactctcgcaatttggaagatcaacccgactatgaa
gttaatctgtacatgtatatgtactttgtggtattcatcatatttggatccttctttaca
ctcaacctcttcattggtgtcattatagacaacttcaatcagcaaaagaaaaagtttgga
ggtcaagacatcttcatgacagaggaacagaagaaatattacaatgctatgaagaagctt
ggctcaaagaaaccccaaaagcctatccctaggccagcgaacaagtttcaaggatatgtc
tttgatttcattacaaagcaagccttcgacattgtcatcatgattcttatatgccttaat
atggtcaccatgatggtggagacagacgaccagacggacgacatggatggaattctctac
aagatcaacctggtgtttattgtcatgtttaccggagagtgtgttctgaagatgttctca
ctccgccaatactacttcaccattgggtggaatgtatttgactttattgttgttatcctg
tcgataattggtatgtttctgtctgaactgatagagaagtactttgtttcaccaacctta
ttccgagtcattcgactggcccggattggtcgcatccttcgcctcatcaagagtgccaag
ggaatccgtacactcttgtttgctttgatgatgtcacttcctgccttgttcaatattggt
ctcctgctcttcttagtgatgtttatctatgccatctttggcatgtcgaactttgcatac
gtcaggaaggagtctgggattgacgacatgttcaactttgagacatttggcaacagcatg
atttgcctgttccagatcaccacgtcagctggctgggacggcctgctggcacccatccta
aacaagagagagccagactgtgacagccgtaaagagcacccaggcagcaagtacaagggg
ggagactgtgggaacccccttgtagccattatcttcttcgtgagctacatcataatctgt
ttcctcattgtggtcaacatgtacattgctgtcatcctggagaacttcagtgtggccact
gaggagagcgctgagcccctgagcgaggatgactttgagatgttctacgaggtctgggag
aagtttgatgcacgggccacccagttcatggagtatgagaagctgtctgacttcgctgat
gctttggaccccccgctacgcatttctaagcccaacaagatccagttgatctacatggat
ttgcccatggtgagtggggagcgcatccactgcctggacatcctgtttgccttcaccaag
cgcgtcctgggtgagggcgaaggcttggacatcctccggggtcaaatggaggagcgcttt
atggcctccaacccctccaaggtgtcctacgaacccatcaccaccacgctacgccgcaaa
caagaagacatgtctgccctggtaattcagagagccttcagacgatatctgctcagacgt
attgttaaacgggcctctgccatgtacaaagagaagatgctccttgataaagaggttctc
gtcatagacaaatttaacgagatctctacttcagacagaactgacatgacatcytccaca
gcctctcccccatcatatgacagtgtaacaaaaccagagaaaaacaaatatgaaaaagac
aagagagagaaggaggtgaagaagaaaaagaagtga
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