Salvelinus sp. IW2-2015 (Arctic char): 111962352
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Entry
111962352 CDS
T05762
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111962352 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111962352 (nup93)
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111962352 (nup93)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
RESC9_N
TarH
Motif
Other DBs
NCBI-GeneID:
111962352
NCBI-ProteinID:
XP_023841154
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Position
LG4q.1:29:complement(64066831..64100604)
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AA seq
844 aa
AA seq
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MSFWKTRHHPITVDLRSAGVKFVAMEAEGFGELLQQAEQLAAETEAVSELPHVERNLQEI
QQAGERLRSRTLTRTSQDAADVKASILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDT
DIQGFLKNERDNALLSAIEESRRRTFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDAL
DFSQDIEPSFVSDAGVPGRSALDSVEVAYGRQIYVFNEKIVNGHVQPNLGDLCASVADSL
DDKNVSDMWLMVKQMTDVLLVPAKDTLKSRTALDMQMAFVTQALQFLQNSYKNYTMVTVF
GNLHQAQLGGVPGTYQLVRSFLNIKLPGPLPGMQDGEVEGHPVWALIYYCLRCGDLGAAM
QVVNRAQHQLGDFKTWFQEYMNSPDRRLAPATENKLRLHYRRVLRNCADPYKRAVYCLIG
KCDIADNHGEVADKTEDYLWLKLNQVCFDDDGSSAPQDRLTLAQLQKQLLEDYGESHFSA
SQQPFLYFQVLFLTAQFEAAVAFLFRVERLRSHAVHVALVLYELRLLLKSSGQSAQLLSQ
EAGDPPMVRRLNFIRLLMLYTRKFESTDPREALQYFYFLRNEKNNQGENMFMCCVSELVI
ESREFDMLLGRLEKDGSRKPGVIDKFAGDTRAIITKVALEAENKGLFEEAVRLYELAKNP
DKVLELMNRLLSPVIAQVSAAQSNKERLKNTAVAIAERYRTQGVAGEKSADSTFYLLLDL
MTFFDEYHAGNIDRAYDVMERLKLVPLSQDSVEERVAAFRNFSDEVRHNLAEVLLATMNI
LFTQCKRLKGATAGTPGRPQRSIEDRDSQLRSQARALITFAGIIPYRMAGDTNARLVQME
VLMN
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttggaaaacgagacatcatccaatcaccgtagacctcagaagtgccggggta
aaatttgttgccatggaagcggagggctttggagaactcctgcagcaggcagagcagctt
gcagcagagactgaggccgtgtctgagcttcctcatgttgagaggaaccttcaggagatc
cagcaggctggagagaggctacgctcccgcaccttaactcgaacatcacaagacgctgct
gacgtgaaagcgtccatcctcctggggtccagaggcctggacatcttccacatctcccag
cgtctggagagcctgagtgctgccaccacctttgaacctctagagccagtgaaggacact
gacatccagggctttctgaagaatgagagggacaatgcgctgctctctgccatcgaggag
tcacgtcgcagaacgttcctcttggcagaggagtaccaccgcgagtccatgctggttcag
tgggagcaggtgaaacagagagtactgcacaccttgttgggagcaggggaagatgctctg
gacttcagccaagacatagagcccagctttgtgagtgacgcaggagttcctggacggagt
gctcttgacagcgtggaggtggcctatggacgacagatctacgtttttaatgagaagata
gtgaatggacatgtccagcccaacctgggagacctctgtgcctcagtggcagacagcctg
gatgacaagaatgtgtcagacatgtggttaatggtgaagcagatgacagacgtgctgctg
gtcccagccaaagacacgctgaagagccgcacggccttggacatgcagatggctttcgtc
acgcaggcccttcaattcctgcagaacagctataagaactacaccatggtgacggtgttt
gggaacctgcaccaggcccagctaggaggagtccctggcacctatcagctggtgcgcagc
ttcctcaacatcaaactgccagggcctctgccaggcatgcaggatggtgaggtggagggt
cacccagtctgggctctgatctactactgcctrcgctgtggggacctgggggctgccatg
caggtggtgaaccgggctcagcaccagctgggagacttcaagacctggttccaggagtac
atgaacagccctgacagacgcctggcccccgccacagagaacaagctgcgtctccactac
cgcagagtgctgaggaactgtgctgacccctacaagagggccgtctactgcctcatcggg
aagtgtgacatcgcagacaaccatggagaggtggctgacaagaccgaggactacctgtgg
cttaagctcaaccaggtgtgcttcgatgacgacggcagcagtgctcctcaggacagactg
acactggcccagctacagaaacagcttctagaggactacggagagtcccacttctcggcc
agccaacagccgtttctatacttccaggtgctgttcctcacggcccagtttgaggctgct
gtggccttcctgttccgggtggagcgtctacgcagtcatgcagttcacgtggctctggtt
ctctacgagctacggctgctgctcaagtcatcaggacagagygcacaactgttgagtcag
gaagctggggacccccctatggtgcgtcggctcaacttcatccggctgctcatgctctac
acgcgcaagtttgagtccacagacccccgggaggctctacagtacttctacttcctacgg
aatgaaaaaaacaaccaaggagagaacatgttcatgtgctgtgttagcgagctggtgatt
gagagtcgagagtttgacatgcttctaggaagactggaaaaagatggcagcagaaagcct
ggagtgattgataaatttgccggagacactcgagccattatcacaaaagtggcgctggag
gctgagaacaagggcctgtttgaggaagcagtcagactgtatgagctggccaagaatcca
gacaaggtcttagagctgatgaacaggctgctgagtcctgttatcgcccaagtcagcgct
gcccagtccaacaaggagagactgaagaacactgctgttgccatcgctgagcggtaccgg
acccagggtgttgctggagagaagtctgcagacagcaccttctacctgctgctggacctc
atgaccttctttgatgagtaccatgctggaaacatagaccgggcctatgatgtgatggag
agactgaagctggtccctctgagtcaagacagtgtggaggaaagggtcgctgcatttcgc
aatttcagtgatgaggtcaggcataatctggcggaggtactcctggccaccatgaatatc
ctgttcacgcagtgcaagcgcctgaagggggccacagcaggaacccctggtcgaccacag
aggtccatcgaggacagagactcgcaactgcgcagccaagcccgtgcactgatcacattt
gctgggattatcccgtaccgcatggcaggcgacaccaatgcccggctggtgcagatggag
gtcctgatgaactga
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