Salvelinus sp. IW2-2015 (Arctic char): 111962503
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Entry
111962503 CDS
T05762
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03020
RNA polymerase
salp04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111962503 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
111962503 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111962503 (polr3b)
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111962503 (polr3b)
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
111962503 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
111962503
NCBI-ProteinID:
XP_023841408
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All DBs
Position
LG4q.1:29:complement(72573060..72622486)
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AA seq
1132 aa
AA seq
DB search
MEILGEEFGDMTPQQLAAPVNTXEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTSMEYSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNALSEDAPIAIIF
KAMGVESDQEIVQMIGTEEHVMANFSPSLEECQKAQIFTEIQALKYIGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGENKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKISDQIIPKQRAAQFDIVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIVKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHQRLVYTFRLMRRAGFINEFVSISTNLTDRCVYVSSDGGRLCRPYIIVKK
GQPMVKNKHIEELTQGYRTFEDFLHESLVEYLDVNEENDCQIALYEHMINKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLGYPQKPMVK
TRTIELIDFEKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAATRKPIWRHSILDADGICCPGEKVENKQVLVNKSMPTVTQTPLE
GSAQPGQPQYRDVPVSYKGSTDSYIEKVMISSNADDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVMDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPIEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLARYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcttggagaggagtttggagatatgactccccagcagcttgcggctcctgtc
aatactatkgaggaaaaatggaaactattgccagcttttttgaaggtgaaaggtctggtg
aaacagcacattgactccttcaactacttcatcaatgtggagataaagaagataatgaaa
gcaaatgaaaagatcacaagtgatgctgatcccatgtggtacctaaagtacctcaatata
tacgttggcatgcctgatgttgaagagagcttcaatgtaaccagaccagtgtctccacac
gagtgtcgtctcagggacatgacttactctgcacccatcacagtggacatcgagtacacc
cgtggcagtcagagaatcatccgcaatgctctgcccattggaaggatgcccatcatgctg
cgtagctctaactgtgtcctcacggggaagacgtccatggagtactccaaactcaacgag
tgccctctggacccagggggctatttcattgtcaaaggtcaggagaaggtcattctgatc
caggagcagctgtcaaagaaccgcatcattgtggagcaggacaggaagggggcagtagga
gcctctgtgaccagttccacccatgagaagaagagcaggaccaatatgatcgttaagcag
ggacgcttctacctaagacacaacgcactgtcagaggacgctcccattgccattatattc
aaggctatgggtgtggagagtgaccaggagatagtgcagatgattgggacagaggagcac
gtcatggctaacttctcccccagcctggaagagtgccagaaagcccagatcttcactgag
atacaggctctgaaatacattgggaataaggtgcggagacagcgcatgtggggagggccc
aagaagaccaagatggaggaggccagagagctgttggcttccctcatcctcactcatgta
cctgtgaaggagttcaacttccgggccaagtgtatctacctcgcagtgatggtgcgcagg
gtgatcctagcccaaggagagaacaaggtggatgacagagactactatggcaacaagcgc
ctggagttggctggacagttgctgtctctgctgtttgaggatctctttaagaagttcaac
tccgagctgaaaaagatctctgaccagatcatccccaagcagcgggcggcacagtttgac
attgtcaaacacatgcgccaggaccagatcaccaacggcatggtcaacgccatctccacc
gggaactggtccctgaagaggtttaagatggaccgtcagggtgtgacccaggtgctgtcc
cgtctctccttcatctctgctctgggcatgatgaccaggatctcctcccagtttgagaag
accaggaaggtcagcggaccccgctccctgcagccctcccagtggggcatgctgtgcccc
tccgacacccctgagggagaggcctgtggtctggtgaagaacctggccctgatgacccac
atcaccacagacatggaggacggccccatcgtcaagttggccttcaacctgggagtggag
gatgtcaacctgctgtgtggagaggagctctcctacccaagtgtcttcctggtcttcctc
aatggtaacatcctgggggtgatccgggaccaccaaaggctggtgtacaccttcagactg
atgcgacgggccggattcatcaacgagtttgtgtccatctccaccaacctaaccgaccgc
tgtgtctacgtctcctcagacggaggacgcctctgcagaccgtatatcattgtgaagaaa
ggacagccgatggttaagaacaaacacatcgaggagttgacccagggatacagaaccttt
gaagatttcctccatgagagcctggtggagtacctggacgtgaacgaggagaatgactgt
cagatcgccctctatgaacacatgattaataaggacactacacacttggagattgagccc
ttcacactactaggggtctgtgctggcctgatcccctacccccatcacaatcagtccccc
aggaacacataccagtgtgctatgggcaagcaggccatgggtacgattggctacaaccag
aggaaccgtatagacactctgatgtacctgctgggctaccctcagaagcccatggtcaag
actaggaccatagagctgatagactttgagaagctgcctgcgggccagaacgccacagtg
gctgtgatgagctacagcggctacgacatagaggacgctctgatcctcaacaaggcctct
ctagacagaggatttggaagatgcctggtctacaagaacgccaagtgcacgttgaggcgc
tacaccaatcagacctttgacaaggtgatgggtcccatgctggacgcggccacacgcaag
cctatctggaggcacagtatcctggatgctgacggcatctgctgccctggtgagaaggtg
gagaataagcaggtgctggtgaacaagtccatgcccactgtcacccagacaccactggag
ggcagtgcccagccaggacagccccagtacagagatgtgcccgtcagttacaagggctcc
acagactcctacatcgagaaggtgatgatctcctccaatgcagacgatgctttcctcatc
aagatcctgctgagacagaccaggagaccagagataggagacaagttcagcagtcggcac
ggacagaaaggtgtgtgtggccttatcgttcctcaggaggacatgcccttctgtgactcg
ggcatctgccctgatatcatcatgaacccgcacggctacccctccagaatgacggtgggg
aagctgattgagctgctggctggtaaagcgggggtgatggacgggaggttccactacggc
acggccttcgggggcagcaaggtaaaggacgtgtgcgaggacctgatccgctatgggtac
aactaccagggcaaggattacgtcacctcgggcatcactggagagccaattgaggcctat
atctactttggacctgtttattatcagaagctaaagcatatggtgctggacaagatgcac
gccagagcccgcggcccccgagctgtgctcaccagacagcccacggaggggcgctctaga
gacggaggcctacgtctgggggagatggaacgtgactgtctgattggctacggggccagc
atgttgctgctggagcgcctcatgatctccagtgacgccttcgaggtggacgtgtgcggt
cagtgtggcctgctgggatactccgggtggtgccactactgtaagtcctcctgtcacgtg
tcctcgttgcggataccctacgcctgcaaactgctcttccaggagctgcagtccatgaac
atcattccccgcctcaaactggcacgctacaacgagtaa
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