Salvelinus sp. IW2-2015 (Arctic char): 111963060
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Entry
111963060 CDS
T05762
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
salp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111963060
04082 Neuroactive ligand signaling
111963060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111963060
Ion channels [BR:
salp04040
]
Ligand-gated channels
GABA-A
111963060
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
111963060
NCBI-ProteinID:
XP_023842048
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Position
LG4q.2:complement(28307153..28363446)
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AA seq
387 aa
AA seq
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MTLYLRHYWKDERLSFTSSTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTVNIMLR
VFPDGHVLYSLRVTVTAACNMDFSRFPLDTQSCSLELESYAYTDEDLMLYWKSGDESLST
DDRISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLS
WVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSV
LEYAAVNYLSTAQDRRERKMRDEMRERARSQSLPCTCGMSQTRTMLLDGTYSEADTNSLA
GYTSGTMGPEEDMDMPRDMMTEKQPPGEHTVVHLSASSESTTTKKKGIRALNIIQNTHAI
DKYSRMLFPGSYILFNIIYWCSYCIGA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgtacctgagacactattggaaggacgagcgtctgtccttcaccagctccacc
aataagagcatgacatttgacgggcgtctggtcaagaagatctgggtgcccgatgtgttc
ttcgtccactccaagagatccttcatccatgacaccaccacagtcaacatcatgctcagg
gtttttcctgacggacacgtcctctacagcctgagggtgacagtgaccgcagcctgtaac
atggacttcagccgcttccctttggacacccagtcctgctccctggagctagagagctat
gcatatacggatgaggacctgatgctgtactggaagagtggggatgagtccttgagtacg
gatgaccgtatctccttgtctcagttcctcatccagaagttccacaccacatctcggctg
gccttctacagcagtactggctggtacaaccgtctgtacatcaacttcaccctgcggaga
cacatcttcttcttcctgcttcagacctacttcccggctaccctcatggttatgctgtcc
tgggtgtccttctggattgaccgcagggccgtcccagctcgtgtctccctgggtatcact
acagtgctcaccatgtccaccatcatcactggagtcaacgcctccatgcccagagtgtcc
tacatcaaagcagtggacatctacctgtgggtcagcttcgtgtttgtcttcctgtctgtc
ctggagtacgctgctgtcaactacctgtccaccgcacaggaccgcagggaacgcaagatg
agggacgagatgagggaaagggccaggtcacagtcgctgccctgcacctgtggcatgtcc
cagaccaggaccatgctattagacgggacctacagcgaggcggacactaacagcctggcc
ggctacacctcaggaactatggggcccgaggaggacatggatatgccccgcgacatgatg
actgagaagcagcctcctggagaacacacagtggtccacctgtctgccagcagcgagtca
acgacaaccaagaagaaaggcatcagggccctcaatattatccagaatacacacgccatc
gacaagtactccaggatgttattccctggctcctatattctattcaacataatctactgg
tgttcatactgtataggagcgtag
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