Salvelinus sp. IW2-2015 (Arctic char): 111963931 Help Entry 111963931         CDS       T05762                                  Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism salp  Salvelinus sp. IW2-2015 (Arctic char) Pathway salp04010   MAPK signaling pathway salp04137   Mitophagy - animal salp04141   Protein processing in endoplasmic reticulum salp04210   Apoptosis salp04217   Necroptosis salp04621   NOD-like receptor signaling pathway salp04622   RIG-I-like receptor signaling pathway salp04920   Adipocytokine signaling pathway salp05132   Salmonella infection salp05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:salp00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     111963931  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     111963931  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     111963931   09143 Cell growth and death    04210 Apoptosis     111963931    04217 Necroptosis     111963931  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     111963931    04622 RIG-I-like receptor signaling pathway     111963931   09152 Endocrine system    04920 Adipocytokine signaling pathway     111963931  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     111963931   09171 Infectious disease: bacterial    05132 Salmonella infection     111963931  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:salp03019]     111963931    04121 Ubiquitin system [BR:salp04121]     111963931 Enzymes [BR:salp01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      111963931 Messenger RNA biogenesis [BR:salp03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      111963931 Ubiquitin system [BR:salp04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     111963931 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_2 SlyX zf-C3HC4_4 Sina_ZnF DUF4795 Motif Other DBs NCBI-GeneID:  111963931 NCBI-ProteinID:  XP_023843295 LinkDB All DBs Position LG5:12355490..12371679 Genome browser AA seq 596 aa AA seqDB search MATQEPSPPSSMESNKPGFPKKILANKLEDKHLCNCCHNLLRRPFQAQCGHRFCSYCFNM TVRDGPQKCNACIKEDIFEEPTSILKQGCAFPDNAARREVENLSAVCINEGCTWKGNIKE YELSHEEKCEYMIIPCPSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKERIHDHERACA YEHLNLLLHYIMGMKVSMEGLQPQGLELAGHKLLDLHRSLRELEIRVSQLSTTSIGPPVQ GATSSSSSSLGLPGPPTPALPLPPPPAPVPTLTVSTSFTPLPSSVGAALELQLHSEKTKV AELGRRCTDLEVKVGTFENVVCVLNREVERFTTTMEAGNRQHRLDQDKIEALSNKVRQLE RTVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFTKKRQDAIAGRAPAMFSPAFYTSK YGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSSREHIID AFRPDITSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDIIFIKAIVDLTGL NT seq 1791 nt NT seq  +upstreamnt  +downstreamnt atggccacgcaagaaccatcccctccatcgtccatggagagcaacaaacccggcttcccc aagaagatcctggccaataagctggaggataagcacctgtgtaactgctgtcacaacctg ttgcggaggcccttccaagcccagtgtggacaccgcttctgttcctactgcttcaatatg actgtcagagatggacctcagaaatgcaatgcttgtatcaaagaggacatttttgaagag cccacatcaattctaaaacaaggctgtgcttttcctgacaacgcagctcgaagagaggtc gaaaacctctctgctgtctgcataaacgaaggttgcacttggaaaggcaatattaaagaa tacgagttgagccacgaagagaagtgtgagtacatgatcatcccctgcccttcctgtaaa gagcggatccgcttcaacgaacaggaacgccacaacgagcgagagtgccctgagagaacc ctcaactgcaagtactgcaaggaaccatttcatttcaaaaacatcaaggcccacgacgag atctgccccaagtaccccatgatctgtgaaggctgtgccaagaagaaaatccccagggag aagtatgtggaccacattaagttctgcagcaaattcagaacgccatgcagattccatgtt gttgggtgtgatatgtcagtggagaaggagaggatccacgaccacgagagggcctgcgca tacgagcatctaaacctgctgctacactacattatgggcatgaaggtgagcatggagggc ctgcagccgcagggactggagctagccggacacaagctcctggacctccaccgttccctc agggagctggagatccgcgtctcccagctcagcaccacctcgatcgggcctcccgtgcag ggggccacctcctcctcttcctcctccttaggtctccccgggcctcctaccccggctctt cctctgcctccacctcccgccccagtcccaaccctgaccgtgtccacctccttcaccccc ctgcctagctcggtgggggcggccctggagctgcagctccacagtgagaagaccaaggtg gcggagctgggacgcaggtgcactgacctggaggtgaaggtggggacgtttgagaatgtg gtgtgtgtgttgaaccgagaggtagaacgcttcaccaccaccatggaggcaggtaacaga cagcatcgcctggaccaggataagattgaggccctgagcaacaaggtgcggcagctggag aggacggtggggctgaaggacctgacggtagcggagatggagggcaggctgagagagatg tcggccaccacattcgatggcgtcttcgtctggaggatctctgacttcaccaagaagaga caggacgccattgctggccgagcccccgccatgttctcaccagccttctacaccagtaaa tacggctataagatgtgtctgcggatctacctgaatggggacgggacagggcgtggcagt cacctgtctcttttctttgtggtgatgagaggactgagtgatgctctgctgaaatggccc ttcaaccagaaggtgactctgatgctgctggaccagagtagcagggagcacatcatcgac gccttccggcctgacatcacttcctcctccttccagaggcctgtgagcgagatgaacatc gccagcggctgcccgctgttctgcccgctctcaaagcttgacgccaagaactcctacatc cgcgacgacataatcttcatcaaggccattgtggatctcacaggcctttag

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