Salvelinus sp. IW2-2015 (Arctic char): 111964263
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Entry
111964263 CDS
T05762
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-3
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
salp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111964263
04082 Neuroactive ligand signaling
111964263
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111964263
Ion channels [BR:
salp04040
]
Ligand-gated channels
GABA-A
111964263
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
111964263
NCBI-ProteinID:
XP_023843859
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Position
LG5:complement(30130755..30152072)
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AA seq
434 aa
AA seq
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MNLVLLAFRLMCLAWLWPVTLLNGSQRPNKRRHKDVYLGENTKNQHGGRIDFKMKKSDST
KSLLIKSEQLLRIEDHDFAMRPGFGGAAIPVGIDVQVESIDSISEVNMDFTMTLYLRHYW
QDDRLAFPSSSNRSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILY
SVRITVTALCAMDFSSFPLDTQNCSLELESCWYNRLYINFILRRHIFFFMLQTYFPTMLM
VMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVSASMPQVSYVKAVDIYLWASFLFV
FLSVIEYATVNYFTTVEEMKKLKGGKIPANFNATQTMAFDGCYHDNDIDLMPYPELPSTP
NTERSRTATLRNSRNSAAEPPPTEGTRLRRKKSIKHNLSFIMSNSYMIDSYSRVIFPMTY
LLFNITYWSLYSSR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggtgctcctggccttcaggctgatgtgcctggcctggctgtggcctgtcaca
ctgctcaacggcagccaacgacccaacaagaggaggcacaaggacgtgtaccttggggag
aacaccaagaaccaacatggaggacgaatagactttaagatgaaaaagtctgacagcacc
aagtccctgctaattaaatctgaacagctgctccgtatcgaggaccatgactttgcaatg
cggcctggctttggaggggcagctattcctgtgggcatagacgtgcaggtggagagcatt
gacagtatatctgaagtcaacatggacttcaccatgactctgtacctgagacactactgg
caggacgaccggctggcattcccttccagcagcaacaggagccggacatttgacgctcgg
ctggtgaagaagatctgggtgccggacgtgttctttgtccactccaaacgttctttcatc
catgacacgaccatggagaacatcatgctgagggtgtaccctgacggcaacattctctac
agtgtcaggatcactgtaactgctctttgcgccatggacttcagtagttttccgttggac
acacagaattgctctctggaactggagagctgttggtataacaggctctacataaacttc
atcctcaggaggcacatcttcttcttcatgctgcagacctatttccccaccatgttgatg
gtgatgctctcctgggtgtccttctggattgacaggagggctgtgcccgcccgggtctct
ctgggcatcaccacagttctgaccatgtccaccatcatcacaggcgtgtcagcctccatg
ccccaggtctcttatgtgaaagcggtagacatctacctgtgggccagcttcctgtttgtc
ttcctgtccgtcatcgagtacgccaccgtcaactacttcaccactgtggaggagatgaag
aagctcaaggggggaaagatccctgccaatttcaatgccactcaaactatggcctttgac
ggctgttaccatgacaatgacattgacctgatgccatacccagagctgcccagcaccccc
aacacagagcggagtcggacggccacattgaggaactcgaggaactctgctgcagagccc
ccgcccacggagggcaccaggctacgacgcaaaaaatccatcaaacacaacctcagcttc
atcatgagtaacagctacatgatcgactcctactccagagtcatcttccccatgacctac
ctgctgttcaacatcacctactggagcttgtactccagtaggtga
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