Salvelinus sp. IW2-2015 (Arctic char): 111965403
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Entry
111965403 CDS
T05762
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111965403
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
111965403
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
MS_C
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
111965403
NCBI-ProteinID:
XP_023845361
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Position
LG6.1:28976093..28978715
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AA seq
254 aa
AA seq
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MYVSYLMDKNTGMYSNSVGHPTQPLNSQNFMQYTDFTGYHHVTGVSDPHAQTTGVWNPAY
LAGPREQWSPYGQSADFHGLSPGTEQINFSSPDLTSILPTGPGTLPSLNSPAGQYSPDSE
RRNSYDWIRHNVHSSSTGGKTRTKDKYRVVYTDEQRLELEKEFQYSRYITIRRKTELALG
LSLSERQVKIWFQNRRAKERKITKKKIQQSQQASKTTTTLTFTPSCLADPSNGSMATSSS
LLSEKISMTIKEEY
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagttacctgatggataaaaacaccggaatgtactcaaattccgtgggacac
ccgactcaacctctgaacagtcagaacttcatgcagtatacggatttcaccggttatcat
cacgtcacaggcgtcagtgacccgcatgcccagacgacaggtgtgtggaaccctgcttac
ttagcaggtccgcgggagcagtggtcaccgtatggccagagcgcggacttccacggtttg
agcccaggtacagaacagatcaatttcagttccccggatctgacatccatcctgcctacg
gggccgggaactcttccttcactcaactcacctgccgggcagtactctccagactcagag
agaagaaactcatacgactggatcagacacaatgtacattcatccagtacaggagggaag
acgcggaccaaggacaagtacagggtggtgtacacagacgagcagcgcctagagctagag
aaggagttccagtacagccggtacatcaccatcaggaggaagacggagctggcactgggc
ctcagcctctcagagagacaggtaaagatctggttccagaacaggagagccaaggagagg
aaaattaccaagaagaagatccagcagtcccagcaggcctctaagactacaactaccctg
acctttactccatcctgcctggctgaccccagcaacggctccatggcaaccagctccagc
ttgttgtcagagaaaatatcaatgactatcaaagaggagtactga
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