Salvelinus sp. IW2-2015 (Arctic char): 111966433
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Entry
111966433 CDS
T05762
Name
(RefSeq) troponin C, skeletal muscle-like
KO
K12042
troponin C, skeletal muscle
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04020
Calcium signaling pathway
salp04814
Motor proteins
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111966433
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111966433
04820 Cytoskeleton in muscle cells
111966433
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111966433
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
111966433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
EF-hand_FSTL1
EH
AIF-1
EF-hand_11
SPARC_Ca_bdg
SAPC2_N
TerB
Syntaxin
EF_EFCAB10_C
EMG1
EF-hand_EFHB_C
Motif
Other DBs
NCBI-GeneID:
111966433
NCBI-ProteinID:
XP_023846825
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Position
LG7:complement(13632566..13635479)
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AA seq
160 aa
AA seq
DB search
MTDAQQEARSFLSEEMLNEFKAAFDMFDTDGGGDISTKELGQVMRMLGQNPTREELDEII
EEVDEDGSGTIDFEEFLVMMVRLLKEDQAGKSEGELAECFRVFDKNADGYIDREEFAIII
RSTGEQISEEEIDELLKDGDKNADGMLDFDEFLKMMENVQ
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgcacaacaggaggcccgctcattcttgagcgaggagatgcttaacgaattc
aaggctgccttcgacatgttcgacaccgacggtggcggtgatatcagtaccaaggagttg
ggtcaggtcatgaggatgttgggccagaacccgacaagagaggagttggatgaaatcatt
gaggaggtcgatgaggatggcagcggcaccatcgacttcgaggagttcttggtcatgatg
gtgagactcttaaaggaggaccaggccggaaagtctgagggagagttggcggaatgtttc
cgtgtgttcgacaagaatgccgacggctacatcgacagggaagagttcgccatcatcatc
cgcagcacaggcgagcaaatctcagaggaggagattgatgagctgttgaaagatggagac
aagaacgctgatggcatgctggactttgatgagttcctcaagatgatggaaaatgtgcag
taa
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