KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111966510
Entry
111966510         CDS       T05762                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111966510 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:salp03041]
    111966510 (bcas2)
   03400 DNA repair and recombination proteins [BR:salp03400]
    111966510 (bcas2)
Spliceosome [BR:salp03041]
 Complex B
  Other components
   Prp19 complex
    111966510 (bcas2)
 Complex C
   Prp19-CDC5 complex
    111966510 (bcas2)
DNA repair and recombination proteins [BR:salp03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    111966510 (bcas2)
SSDB
Motif
Pfam: BCAS2 THOC7 RRP36
Other DBs
NCBI-GeneID: 111966510
NCBI-ProteinID: XP_023846983
LinkDB
Position
LG7:complement(17411218..17415861)
AA seq 225 aa
MAGTSSVAGEVFVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYMPTPDFTT
FETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQESVNNSMAQLEHQAVR
IENLELMAHYGTNAWKVYNDNLAFMIELAQKELQKCRKQIQDLNWQRKNDQLAGGAKLRE
LESNWVSLVSKNYEIERAIVQLENEVGQLKQQHGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggctggaacttcttcagtagctggtgaagtatttgtcgatgccctaccgtattttgac
cagggttatgatgcagcgggcgttagagaggcggctgcagccttggtagaggaggagact
cgccgatacagacccaccaagaactacctcagttatatgccaacacctgatttcactaca
tttgaaactgaaatcatgaggaacgagtttgagaggctagcagcccggcagcccctggaa
cttctcagcatgaagagatatgagcttccagctccatcatcagggcagaagaatgacatc
actgcatggcaggagagtgtgaacaactccatggctcagctggagcatcaagcagtgcgc
attgagaacctggaacttatggcacactacggtaccaatgcatggaaggtctacaatgat
aacctggcctttatgattgaattggctcaaaaagaactacagaaatgtagaaagcagatt
caggacttgaactggcaacggaagaatgatcagcttgcaggcggggccaagctgagagag
ctggagtcaaattgggtgtccctcgtaagtaagaactatgagattgaacgtgccatcgtc
cagttggagaatgaagttggacagctcaaacagcagcatggtgacgagaacaaggaaaac
attcgacaggacttctag

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