Salvelinus sp. IW2-2015 (Arctic char): 111966828
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Entry
111966828 CDS
T05762
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111966828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111966828
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111966828
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111966828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-RING_4
Prok-RING_4
zf-RING_10
zf-rbx1
zf-RING_6
zf-C3HC4_4
zf-RING_11
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
111966828
NCBI-ProteinID:
XP_023847545
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All DBs
Position
LG7:complement(31751923..31769957)
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AA seq
390 aa
AA seq
DB search
MVGSANNFFSSDEMSVRGGQGSDEVLVSQAVWDYLAAAGQPWLIDFQDKQGLSAGIIRRG
ERGGCCAVRLRPIEGSRSGGGPGMMEEGPISNETRKAFIDLCRCARKEMSKQDGGPKRKR
SLLPCVGVGVLEGDGEGSLLPPQPPQPRRSQRQQQRYKKPAEEEACVVLSNSTSHNESGQ
RKMEVSCSMMASSHNQSHSEAEDYTSCSICMGDMVERTTLERCGHAFCRLCLDQAFKVKR
ACPVCRQVYGQLIGTQPATGCMMVERDPDLELTGHEGYGCICIIYSFPPGLQALEHPNPG
VRYPGTDRVAYLPDSPEGNRVLGLLRRAFEQRLIFTIGTSMTTGMHNVITWNDIHHKTSL
WGGPHCFGYPDPTYLVRVTEELREKGITAD
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggttggaagtgcaaacaatttcttttcatcggatgagatgagtgtgcgcggggggcag
ggtagtgacgaggtgctggtgtcccaggcagtgtgggactacctggctgccgccggccag
ccctggctcatagactttcaggacaagcagggcttgagcgccggcatcatccgccgaggg
gagcggggaggctgctgcgcagtgcggctacgccccatagagggatcccgctctggggga
ggacccgggatgatggaggaaggacccatctccaacgagacccgcaaggccttcatagac
ttatgccgctgcgcccggaaagagatgagcaaacaggatgggggtcctaaacggaagagg
tccctgctgccctgcgttggggtgggggtcctggagggggatggagaggggagcctgcta
ccacctcagcctccccagcccagacgctctcagaggcagcaacagagatataagaagcca
gcggaagaagaggcctgtgtggtcctctccaactccacgtcccacaacgaatccggacag
aggaagatggaggtcagctgcagtatgatggcctcctctcataaccaatcccacagtgaa
gcagaggactacacctcatgttccatctgcatgggwgacatggtggagaggaccacgctg
gagaggtgcggccacgcattctgccggttgtgtctggaccaggccttcaaggtgaagaga
gcgtgtcctgtgtgtcgtcaggtgtacggccagctcatagggacccagccggctaccggg
tgtatgatggtggagagggacccagatctggagttgacaggacacgagggttacgggtgt
atctgcatcatctacagcttcccacctggtttacaggcgctggagcaccctaacccgggg
gtgaggtaccctgggacggaccgcgtrgcttacctcccagacagcccagaggggaaccgg
gtcctgggcctgctccgccgggccttcgagcagcgcctcatcttcaccatagggacctcc
atgaccacaggaatgcataacgtcattacctggaacgacatccaccacaagacctcctta
tggggcggaccacactgctttggatatccagaccccacttacctggtgagagtgaccgag
gaactcagagagaaaggcatcactgcagactga
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