Salvelinus sp. IW2-2015 (Arctic char): 111967452
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Entry
111967452 CDS
T05762
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111967452
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
111967452
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Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
DUF7645
Motif
Other DBs
NCBI-GeneID:
111967452
NCBI-ProteinID:
XP_023848257
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Position
LG8:13793596..13797224
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AA seq
271 aa
AA seq
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MYVGYLLDKEGSMYHQGPVRRSGINIPPQNFVSTPQYSDFTGYHHVPNMDTHTQSSGAWG
APYVAPREDWGAYSLGPPNTIPTPMNNSSPGQASYCSPEYNPMHAPGSAVLQPPPDNISV
AQLSPDRERRNSSYQWMSKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIR
RKSELAGNLGLSERQVKIWFQNRRAKERKLIKKKMGSDGSGGSVHSDPGSVSPLPVPGSL
SPSDIHGSLYPPPGMNNLPSIRNIQQVTVTQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgggatacctcttggataaagaaggcagcatgtatcaccaaggacctgtaaga
cgatcgggaatcaacatcccaccacagaactttgtttccacgccacaatattccgacttt
actggataccatcatgtgccaaacatggatactcatacacagtcttcgggggcttggggg
gctccttatgtcgcaccgagggaggactggggcgcctatagtctggggcctccaaacact
attcctacgcccatgaacaactcctcaccgggacaagcttcctattgctcacctgaatac
aatcccatgcacgcgccagggtcagcagtattgcaaccacctccagataatatttctgtt
gctcaactttccccggatagagaaaggcgcaattcttcttaccagtggatgagcaaaacg
gtacaatcatcttctacgggcaaaacaagaacgaaggagaaatacagagtggtttacacc
gatcaccagagactggaactggagaaggaattccattttaatcgttacatcactatcaga
agaaagtcagaacttgcggggaaccttggcctttcagaacgacaggtgaagatctggttt
caaaatcgcagagccaaggagaggaaattaatcaaaaagaaaatgggatctgatggcagt
ggaggatcagtgcacagtgacccgggttcagtgagtcctctgcccgtaccaggctcactc
agtccgtcggatattcacggctctctctacccaccccccggaatgaacaacttgccatct
attaggaacatacagcaagttactgtcactcagtag
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