Salvelinus sp. IW2-2015 (Arctic char): 111967613
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Entry
111967613 CDS
T05762
Name
(RefSeq) alpha-internexin
KO
K07606
vimentin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111967613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111967613
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111967613
04147 Exosome [BR:
salp04147
]
111967613
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
111967613
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
111967613
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111967613
Exosomal proteins of other cancer cells
111967613
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DivIC
TPR_MLP1_2
PI3K_P85_iSH2
Filament_head
FlxA
Motif
Other DBs
NCBI-GeneID:
111967613
NCBI-ProteinID:
XP_023848548
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Position
LG8:complement(23253241..23272948)
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AA seq
393 aa
AA seq
DB search
MAMLRVSSYRRQFEEQRSRNGRSSGGCGGQYRSSAVKARGAAAEECTCDQLDFVAAKTLN
KESLVRFAKDRSIIAALNDRFVALINMARCFEEDNESLEAQICELEERMTGQQTTSTAVA
VPEYSLDAVVERLRKERDQSLFDAEELRRELECLQEQYEETVQQRTLIQLEQEDVGLEVD
VVTTDCLALREQVKIYEEQLARMEAQHETTVQNMVAPVDGPXAAGRGVLEFCNPDIKSAI
IYIKENYSQLAETIQCECRETGVVVAGAVVAIGAGKELTVARPAGVTGVGQITDVSELKK
LIAELEKELAELEKCGEELEDEIEMKREAYVEEIFELECRIEEMREQQHDMQVQMREQCD
DYEELLGQKMAREIEIAAYRGLVEEEDERLCYL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgagagtgtcgtcctaccgccggcagtttgaggagcagaggagtcggaat
ggacggtccagcggtggctgtggagggcagtaccgctcctcagcggtcaaggccaggggt
gcggctgctgaggagtgtacgtgtgaccagctggactttgtggctgccaagacgctcaat
aaggagagtctggtccgattcgctaaagaccgcagcatcattgccgccctaaatgatcgc
tttgtcgccctcatcaacatggcacgctgctttgaggaggacaatgagtctctggaggcc
cagatctgtgagctggaggagaggatgaccggccaacagaccacctccactgccgtagct
gtccctgaatacagcctggacgccgtggtggagagactgcgcaaggagagggaccagagc
ctgtttgatgcggaggagctgaggagagagctggagtgtctgcaggagcagtatgaggag
accgttcagcagaggaccctcatccaactggagcaggaagacgttggcctggaagtggat
gtagtgaccacagactgtctggccctgagggagcaggtgaaaatctatgaggaacaactg
gctcgcatggaggcacagcatgagacgacggttcagaacatggtggcccctgtagatggt
ccagytgcagcagggagaggagtcctggagttctgcaaccctgacatcaagtcagccatc
atatatatcaaggagaactacagccagctggctgagaccatccagtgtgagtgcagggaa
actggtgtggttgttgctggtgctgttgtcgccattggtgctggaaaggagctgacggtg
gccagacctgcgggggtcacaggcgttggccaaataacggacgtcagcgaactgaagaaa
ctgattgcagagcttgaaaaggagcttgcagagctggagaagtgtggtgaggagctggaa
gatgagattgagatgaagagagaagcgtatgtggaggagatctttgagctggagtgtcgt
attgaggagatgcgggagcagcagcatgacatgcaggtccagatgagggaacaatgtgat
gactacgaggagctgctgggtcagaagatggcccgggaaatcgagatcgctgcctacaga
ggtttggtggaagaggaggatgaaaggctttgctacctgtga
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