Salvelinus sp. IW2-2015 (Arctic char): 111970461
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Entry
111970461 CDS
T05762
Name
(RefSeq) integrin alpha-5 isoform X1
KO
K06484
integrin alpha 5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03266
Virion - Herpesvirus
salp04145
Phagosome
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
salp04810
Regulation of actin cytoskeleton
salp04820
Cytoskeleton in muscle cells
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
111970461
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111970461
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111970461
09144 Cellular community - eukaryotes
04510 Focal adhesion
111970461
09142 Cell motility
04820 Cytoskeleton in muscle cells
111970461
04810 Regulation of actin cytoskeleton
111970461
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111970461
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111970461
04515 Cell adhesion molecules [BR:
salp04515
]
111970461
04090 CD molecules [BR:
salp04090
]
111970461
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111970461
Cell adhesion molecules [BR:
salp04515
]
Integrins
Integrin alpha subunits
111970461
CD molecules [BR:
salp04090
]
Proteins
111970461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
DUF11
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
111970461
NCBI-ProteinID:
XP_023852976
LinkDB
All DBs
Position
LG11:complement(44970141..45025606)
Genome browser
AA seq
1063 aa
AA seq
DB search
MGTGRRLSAISVNSILRNPVYCARFVVIAVVFIQLCATFNLETENRIVYSGPKGSFFGYS
VDFFYNNASSFSILIGAPKANTSQTNIIEGGSVYLCPWSQDQSDCSVVIFDNEGDRSFHV
NDVDVQVEFKSHQWFGATVRSHGNTVLACAPRYYWRTEHDAPFSDATGTCYLSVDSLKTF
VEYAPCRTERHGPAGQGYCQGGFSADFTKDGKVVLGGPGSFYWQGQLVSATTEEIVKAYF
PSYFLLSVTGQIQTRQVQGSYDDSYLGYSVAVGEFSGDDIEDFITGVPKGLMLHGLVSLL
NGTDLKSMLNLTGEQMGSYFGYAVAATDINNDGLDDLVVGAPMFMRRGSDGLRWEEVGRV
YVYLQRRPLLFEPSLPPLGGSQAFGRFGSSLAPLGDLNQDGFNDIAIGCPFGGDDQQGLV
LIYNGHASGLKDTPTQALAGQWATGTFPASFGYALRGEKDLDQNGYPDLIVGAFGADKAV
LYRARPIVNASASLTVQPTMINSEEKSCMVSNGNETISVSCVNLSFCLSANGKHLPADLV
FMVEVQLDHLEQKQRESSVRRTLFLDSQQPSLLETITMANGGPTCHDTRIYLRSEGEFRD
KLSPIYISLNFSLDPLAPLDLHGLRPILNYQTTHSIKQKAQIQLDCGEDNICVPDLKLAV
YGDRTEVYLGDENSLTLTFNARNEGEGGAYEAELYVVLPAEADYSGIARNNAQSLTQLTC
SYEAENQTRYLVCDLGNPMKSGTSLWAGLRFTVPRLKDTHNTVQFELQIRSKNENKSQSD
DELFHLEVAVVADVILQGVSHPDKLLFPPPNWRMSHSLQEEQDVGPEIQHVYELVNNGPS
MISQSVLELRCPLKSQGHDLLYPLEVITQGPLDCSSNHTLNALKLKLQPPTTEQPPSPLT
AIPEHHIQRREVYRDTLDEQGNLSCSTAECWRLRCHVGLLERGSSVILTVRSRIWPETFL
ESAYKRYVLECSVEYRVEKMPYSIAPKLKPSGSKKVLTPVMWNKPDSQYMVPLWIIILAI
LAGLLLLALVIYVLYKLGFFKRSNPYGTAMEKAQLKPQASSEA
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgggcactggacggcgactttcagcaatttcagtcaactcaatcctgcgtaatccagtt
tattgcgcccggttcgttgtaattgcagttgtttttatccagctgtgcgcaacgtttaat
ttagaaacagaaaaccggatcgtctactctggacctaagggatcttttttcggttattcc
gtggattttttctacaataatgcatctagtttcagtattctgattggtgctcccaaagct
aacaccagccaaacgaacatcatcgaaggtggatctgtgtacttgtgtccttggagccag
gaccaatcggattgcagtgttgtcatttttgacaatgaaggggatcgcagtttccacgtc
aacgacgtcgacgtccaggtcgagttcaagtcccatcagtggtttggggctacggtgcgt
tcccatggcaacactgtcctggcttgtgccccaaggtattactggagaacggaacacgat
gcccccttctcggatgccacaggaacctgctacctctccgtcgacagcctcaagacattt
gtggagtacgccccctgtcgcacagagagacatggtcctgcaggacagggctactgtcag
ggtgggttcagtgctgacttcaccaaggatgggaaggttgttctcggaggaccaggaagc
ttttactggcaaggccaactagtctcagccaccacagaggaaatcgtcaaggcctacttc
ccatcctacttcctgctctctgttactgggcagatccagactcggcaggtgcaggggagc
tatgacgacagctacctcggttactctgttgctgtcggggagttcagtggagatgatatt
gaagacttcatcaccggagtccccaaaggactcatgctgcatggtttagtgtcattactc
aatgggacagacctgaaatccatgctgaacctaactggagaacagatgggttcctatttc
ggctacgcagtggcagccaccgacatcaacaacgatggtctggatgacctggtggtgggc
gctcccatgttcatgaggagggggtctgacggactgcgttgggaggaggtgggccgtgtc
tatgtgtacctacagcggcgtcccttgttgtttgagcccagcctgccccccttggggggt
agccaggccttcgggaggttcggcagctccctggccccgctgggagacctcaaccaggat
ggcttcaacgatattgcaattggctgtccctttggaggagacgaccaacaaggattggtc
ctcatctataacgggcatgccagtgggctgaaggacacgcccactcaggctctagctggc
caatgggccactggcacctttcctgccagttttggctatgccctccgcggagagaaagat
ctggaccagaatgggtacccagatctcatcgtaggtgcttttggggctgacaaggctgtt
ctgtacagggctcggcctattgtcaacgccagtgcttctcttactgtgcaacctaccatg
atcaactcagaggagaagagttgtatggtgtccaatgggaacgagactatctctgtgtct
tgtgtcaacctcagtttctgcctctcggccaatgggaagcacctccctgctgatctagtt
tttatggtggaggtgcagttggaccatctggagcagaaacagagagagtcatcagtgagg
agaactctgttcctagatagccaacagcccagcctgctggagaccatcaccatggccaac
ggaggaccaacgtgtcacgacacccgcatctacctgcgtagtgaaggggagtttcgggat
aaactgtcccccatttacatcagcctcaactttagcctggatcctctcgctcctctggac
ctccacggcctaagacccattctaaactaccagacaacacatagtataaagcagaaggcc
caaattcagctggactgtggggaggacaacatctgtgttcctgacctcaaactggccgtt
tatggcgataggacagaggtgtatcttggcgacgagaactccctgaccctgaccttcaat
gccaggaacgagggagagggcggggcctacgaggcagagctttacgtggtgctgcccgcg
gaggctgactacagtggtatagcccgcaacaacgcgcagagtctgactcagctgacctgt
agctacgaggcagagaatcagacccgctatctggtctgtgacctgggcaaccctatgaag
tctggaacaagtttgtgggcaggcctccgcttcactgtgcctcgactgaaggacactcac
aatacagtgcagtttgagctccagatacgcagtaaaaatgagaataaatcccagagtgat
gatgagctctttcatctggaagtggctgtggttgctgatgttatcctacagggcgtttct
catccggacaagctcctcttccctcctccgaactggaggatgagccacagcctacaagag
gagcaggatgttgggcctgagatccagcatgtgtacgagttggtgaacaacgggcccagt
atgatcagtcagtcagtgctggagctgcgctgccctctgaaatctcagggtcacgacctg
ttgtaccctctggaggtcatcactcagggaccactcgactgcagctccaaccacacactc
aatgcactgaagctcaagctccagcctcctacaacagagcagccaccctcaccactgaca
gccatccctgaacaccacatccagaggagagaggtctacagggatactctggatgaacaa
ggcaacctgtcgtgttctaccgctgagtgctggaggctgcgctgtcatgtggggttactg
gagagaggaagcagtgtcattctgaccgtccgctcacgcatctggcctgagaccttcctt
gagagtgcatacaagcggtatgtgctggagtgttctgtggagtacagagtcgagaagatg
ccctattccatcgctcccaaactcaaacccagtggatccaagaaggtcctgactccagtg
atgtggaacaagccagacagccagtacatggtaccactgtggatcatcattctggccata
ctggctggattgctgctgctagctctggtcatatatgtactctacaagttgggcttcttc
aaacgatccaatccttatggtacagccatggagaaagctcaactcaaaccacaggcttct
tctgaggcctaa
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integrated database retrieval system
