Salvelinus sp. IW2-2015 (Arctic char): 111971486
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Entry
111971486 CDS
T05762
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111971486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111971486
Spliceosome [BR:
salp03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
111971486
Complex B
111971486
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
111971486
NCBI-ProteinID:
XP_023854051
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Position
LG13:41105423..41127002
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AA seq
496 aa
AA seq
DB search
MTQFLPPNLLALFAPRDPIPFLTQLEKLPHEKHHNQPYCGIAPFIRHFEDPRDAPPPTRA
ETRDERLERKRREKIERRQTVVETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR
REFEVYGPIKRIYIVYNKQSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
GRTVKGWHPRRLGGGLGGTRRGGADVNIKHSGRDDTSRYDDHPPIGGERERERGPEPRGE
RRERSRERERVGEKERGGERRRSRSRERRRRSSRSREKGDRGLGQAGPGEESVVSGRRRD
RERERGGGGPGGDSHSRERSRDKGERKRRSRSRERKRDRERSKGGEGDEGMGLADGMMGE
GGEKMPEEPSVGEEVGEERGGKERDRERDRDRRRSHRDKDRERDRERHRGDREKDREHKR
DRERGGGERREDRHGSLLLPSAEQDDVVNGEEGDAPPQPEENSQDGLTMDQESVQSGEGY
VSNENGYKMETQADEY
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtttttaccccccaatctgctggccctatttgcgccgcgggaccccatacca
tttctgacccagttggagaagcttccccatgagaaacaccacaaccagccatactgtggc
atcgctcccttcatcaggcactttgaggatcccagagatgcccctccccctactagggca
gaaactcgtgatgagaggttggagagaaagaggagggagaagattgagaggaggcagact
gttgtggagacagaactgaagctctgggatccacacaatgacccgaatgctcagggggat
gcctttaagaccctgtttgtggcgcgtgttaattatgacacaacggaatccaagcttcgc
cgtgagtttgaggtctacggacccatcaaaaggatctacatcgtctacaacaagcagtca
gggaagcccagaggctacgccttcatagagtacgagcacgagagagacatgcactctgcc
tacaagcatgcagacgggaagaagatcgacggaaggagagtgctggtggatgtggagaga
ggccgcactgtgaagggatggcatccccgcaggctaggcggtggtcttggtgggacaagg
agaggcggggctgatgtcaacatcaagcactctggaagagacgacacctcacgttatgat
gaccaccccccaattggaggggaacgtgagcgcgaacgtggacctgagcccagaggggaa
cgcagagagcgcagccgtgagcgcgaacgggtgggggagaaagagcgcggtggcgagaga
cggaggtcccggtcccgggaaagacgcaggcgcagctcccgttccagggagaagggcgac
aggggtctgggccaggcagggcccggagaggagagtgtagtgagtggcaggaggagagac
cgagagagggagcgggggggaggagggccagggggagacagtcatagcagggagaggagc
agagacaaaggtgaaaggaagcggaggagccgcagccgagagcgcaagcgagaccgggag
aggagcaagggtggcgagggggatgagggcatggggcttgcagacggtatgatgggggag
ggaggagagaagatgcctgaagagcctagtgtgggtgaggaagtgggagaggagcgcggc
gggaaggagcgggacagggagcgggaccgtgaccggaggcgcagccacagggacaaggac
cgggagagggaccgggagaggcacaggggggacagggagaaagacagggagcataagaga
gacagggagcggggtggcggggagcgcagggaggaccggcatggctctctcctgctcccc
tcggccgagcaggacgacgtggttaacggggaggagggcgacgcgccgccccagccagag
gagaacagccaggatgggttgacgatggaccaagagtcggtgcaatcgggggagggttac
gtttccaatgagaacggctacaagatggagacccaggcagacgagtattaa
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