Salvelinus sp. IW2-2015 (Arctic char): 111972535
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Entry
111972535 CDS
T05762
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
salp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111972535
04082 Neuroactive ligand signaling
111972535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111972535
Ion channels [BR:
salp04040
]
Ligand-gated channels
GABA-A
111972535
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
111972535
NCBI-ProteinID:
XP_023855305
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Position
LG14:complement(15201141..15233553)
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AA seq
479 aa
AA seq
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MPYIKFLFLLFCLILIGECRKHKSRKRRWSGAVESYKHGAPLTGKRMVDNTKSRKLKTDN
LLRVDDHDFTMRPAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPS
TTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMLRVFPDGHVLYSLRVTVTAA
CNMDFSRFPLDSQTCTLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTS
RLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLG
ITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTLRDGKDR
KLREKAREQSLGLAREQSLPCTCGMSHTGTMMVDGTYSESDTNSLAGYTRAPAPEDPPEK
QERMVVHISLDNESTATKKKTRFRSFSFMQNTHAIDTYSRMIFPGSYIIFNLIYWSVYC
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgccttatattaagtttttgttcttacttttttgcttgatacttatcggggaatgccga
aagcacaaaagtaggaaaaggcggtggtccggggcggtggaatcttacaagcatggcgct
cccctgactggaaaaaggatggttgacaacaccaaatctcgcaaattgaagacagacaac
ctgctgcgagtggatgaccatgatttcaccatgagaccagcctttgcaggccctgctgtc
cctgtgggggtggatgttcaggtggagagtttggacagtatatcagaggtggacatggac
ttcaccatgaccctgtatctgaggcactactggaaagatgagaggctgtcctttcccagc
acaaccaataagagcatgacgttcgacgggcgcctggtcaagaagatctgggtgcctgat
gtgttcttcgtccactccaagaggtcgttcattcacgacaccaccactgagaacatcatg
ctcagggtgttcccagacggacacgtgctctacagcctcagggtgacggttactgctgcc
tgtaacatggacttcagtcgtttccctctggattcacagacctgcaccttagagctggag
agctatgcttacacggacgaggacctcatgctgtactggaagagtggggatgagtccctg
agcacggatgacaggatctctctgtctcagttcctcatccagaagtttcacactacctcc
agactggctttctacagcagcacaggctggtacaaccgtctgtacatcaacttcaccctg
cgacgccacatcttcttcttcctgcttcagacctacttccctgccactctgatggtcatg
ttgtcctgggtgtccttctggatcgaccgtcgggccgtaccggccagggtctcattaggt
atcaccactgtgctcaccatgtccaccatcatcactggagtcaacgcctccatgcccagg
gtttcctacatcaaagctgtggacatttacctctgggtcagttttgtgtttgtgttccta
tcggtgctggaatatgctgccgtcaactatctgacaacgttgagggacgggaaagatcgg
aagctcagggaaaaggccagagagcagtccctgggcctggcgagagaacagtcgctcccc
tgcacatgtggcatgtcccacaccgggaccatgatggtggacgggacctacagcgagtcc
gacaccaacagtctagccgggtacaccagggcccccgctcctgaggaccccccggagaag
caggaacgcatggtggtgcacatctccttggacaacgagtccacggcaaccaagaagaag
acgcgcttccgcagcttcagtttcatgcagaacacccacgccatagacacctactcccgc
atgatctttcctggatcctacatcattttcaacctcatctactggtctgtgtactgctga
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