Salvelinus sp. IW2-2015 (Arctic char): 111981921
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Entry
111981921 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2 isoform X1
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111981921
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111981921
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111981921
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
111981921
NCBI-ProteinID:
XP_023869180
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Position
LG20:46019760..46053695
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AA seq
319 aa
AA seq
DB search
MSHPSSAGGGGGGLGAGKAGGGKHGGSGGAAAAAAAVAAAGVGSVAGSVSALPAAVVSLP
SAALPGQSAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPSIR
NLAMEKVASTLPFPCKYASAGCLLSLHHSEKPEHEEVCEFRPYTCPCPGASCKWQGSLEA
VMPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQ
QFFAVVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTSI
AHLFADNGNLGINVTISMC
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagccacccgtcctctgcgggcggcgggggcggaggactcggtgccgggaaagcagga
ggaggaaagcacggaggttcgggaggagctgcggccgccgcagctgcagtcgcggccgcc
ggagtaggatctgtggccgggtctgtctcggctctacctgccgctgttgtttccttgccc
tcagcagcactacctggacaatctgctgaacttacagccttgtttgagtgcccggtttgt
tttgactacgttctgccaccgattctgcaatgccaggccgggcatctagtttgcaaccaa
tgtcgtcaaaagctgagttgttgtccaacttgtcgaggccctctcaccccgagtatcagg
aacttggctatggaaaaagttgcctctactctaccgtttccttgtaagtacgcatcagct
ggctgcctgttgtccctccaccacagtgagaagcctgaacacgaggaagtgtgtgagttc
cgtccctacacatgcccgtgccccggagcttcttgtaagtggcagggctccctggaggcc
gtcatgccccacctgatgcacgcccacaagtccatcaccaccctgcagggagaggacatc
gtcttcctggccacagacatcaacctgccgggggctgtggactgggtcatgatgcagtcc
tgcttcggccaccacttcatgctggtcctggagaagcaggagaagtacgagggccaccag
cagttcttcgccgtggtgctgctcatcggaacaaggaagcaggccgagaacttcgcctac
cgcctggagctcaacgggaaccggcggcgcctcacctgggaggccacgccccgctccatc
cacgacggcgtggcagctgccatcatgaacagcgactgtttggtgtttgacacgtccatc
gcgcacctgtttgctgacaacggcaacctggggatcaacgtcaccatctccatgtgctga
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