Salvelinus sp. IW2-2015 (Arctic char): 112068277 Help Entry 112068277         CDS       T05762                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism salp  Salvelinus sp. IW2-2015 (Arctic char) Pathway salp03040   Spliceosome salp04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:salp00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     112068277   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     112068277  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:salp03041]     112068277    04121 Ubiquitin system [BR:salp04121]     112068277    03400 DNA repair and recombination proteins [BR:salp03400]     112068277 Enzymes [BR:salp01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      112068277 Spliceosome [BR:salp03041]  Complex B   Other components    Prp19 complex     112068277  Complex C    Prp19-CDC5 complex     112068277 Ubiquitin system [BR:salp04121]  Ubiquitin ligases (E3)   U-box type E3    112068277 DNA repair and recombination proteins [BR:salp03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     112068277 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Prp19 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_Aladin NBCH_WD40 Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_SPT8 PEP5_VPS11_N Beta-prop_DCAF4 U-box Beta-prop_HPS5 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_DCAF12 PROPPIN Cytochrom_D1 B-prop_COPA_B_2nd Tricorn_2nd Nucleoporin_N Peripla_BP_2 ATG16 Cep57_MT_bd zf-Nse Motif Other DBs NCBI-GeneID:  112068277 NCBI-ProteinID:  XP_023991142 LinkDB All DBs Position Unknown AA seq 505 aa AA seqDB search MSLVCAISNEVPEHPCVSPVSNQVFERRLIEKYVAENGTDPMNGQPLSEEQLIDIKVSHP IRPKAPSSTSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLVVAQAVASQPSVTAGGAGEPMEVSEQVGMIPEIIQKLQDK ATVLTTERKKRGKTVPEELVRTEDLSKYRQVATHAGLHSASVPGILSLDLCPSDTNKVLT GGADKNVVVFDKKEEQIIATLKGHTKKVTSVIYHPSQSVVFSASPDSTIRVWSVTGGNCV QVVRAHEASVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDEAAGCALTCAQFH PDGLIFGTGTADSQIKIWDLKERTNVANFPGHIGPVTSIAFSENGYYLATGAQDSSVKLW DLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGTDIRVYICKQWSEVLNFTEHTGVVT GVAFGEHAQFLTSTGMDRSLKFYSL NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt atgtccctggtttgtgcaatctcgaatgaggtgccggagcacccctgcgtgtcgccggtg tccaaccaggtgttcgagcggcggctgattgagaagtacgtcgccgagaatggaacagac cctatgaatgggcagcctctgtcagaggaacagctgatagacattaaagtctctcatccc atcagacccaaagctccctcatccactagtatcccagccatcctcaaagctctgcaggac gagtgggatgcggtgatgctccacagtttcaccttgaggcagcagttacagacgacacgt caggagttaagccacgccctctaccagcacgacgccgcctgcagggtcatcgcccgtctc accaaggaggtcactgccgccagagaggctctggccactctgaagccacaggcgggattg gtggtggctcaggcagtcgcttcccagccctctgtcacggctggaggtgcaggagagccc atggaggtcagtgagcaggtgggaatgataccagagatcatacagaagctgcaagacaag gccactgtcctgaccacggagagaaagaagagaggaaagaccgttccagaagagctggtc cgaacggaggacctcagcaagtacagacaagtcgctacccatgctggtctccacagtgcc agtgtgcctgggatcctgtctctggacctgtgtccctccgacaccaacaaagtgctcact ggcggggctgataagaacgtggtggtgtttgataagaaggaggagcagatcatcgcaacc ctgaaaggacataccaagaaggtcacctctgtcatctaycacccctctcagtcggtagtg ttctcggcctctccagacagcactatccgcgtgtggtccgttaccgggggcaactgtgtc caggtggtgcgggctcacgaggcgagcgtcaccgggctctccctccacgccaccggagac tacctgctcagctcctccgaggatcagtactgggccttctctgacatccaaacaggtcgt gttctcaccaaagtcactgatgaggcggcaggatgtgctctgacctgtgcccagttccac cctgacggtctgatcttcgggacggggacggccgactctcagatcaagatctgggacctg aaggagcgcaccaacgtggccaacttccccggccacatcggccccgtcacctccatcgcc ttctctgagaacggatactacctggctacaggtgcccaggacagctcagtgaagctctgg gatctgaggaagctgaaaaacttcaaaaccatcaccctggacaacaactatgaggtgaag tccctggtgtttgaccagagtgggacgtacctggctgtgggtggcactgacatcagggtc tacatctgtaagcagtggtccgaggtcctcaacttcacagaacacactggggtggtgact ggcgtggcgttcggggagcacgcccagttcctcacctccaccggaatggacagaagcctc aagttctacagcctgtaa

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