Salvelinus sp. IW2-2015 (Arctic char): 112070196
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Entry
112070196 CDS
T05762
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
112070196
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
112070196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ
Zip
GPHH
Trimer_CC
Motif
Other DBs
NCBI-GeneID:
112070196
NCBI-ProteinID:
XP_023993381
LinkDB
All DBs
Position
Unknown
AA seq
1903 aa
AA seq
DB search
MVALLPPTGTEVFRRFTLESLAEIERRMAEEAEEQERKKALNIEVAEEDLPKPAVDLEAG
KALPFIYGDPPPELFNTPLEELDPFYKSHKTFIVITKGNTIFRFNAEPACYILTPFSILR
RGSIKILIHSLFSMFIMLTIMSNCVFMTMSDPPAWSKTVEYVFTGIYTVEATVKVFSRGF
CVGDFTFLRDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLADVMILTVFCLAVFALVGLQLFMGNLKQKCVYWPPVEWRLNSTDMDNITMA
FNDTDGFNDVTGYSGTNSSNSTWDFKAYIDDKVNHYFLPGMLDPLLCGNASDAGNCPEGY
TCMKAGGNPNYGYTSYDSFGWAYLALFRLMTQDFWENLFQLTLRSAGKTYMIFFVVVIFL
GSFYLINLILAVVAMAYAEQNEATMAEAKEKEEEYAMIMVQLKERREAEVKERHDRHHEH
HEHAEVAGSQTSLSSRTSKKEKGEMADQEVADDEACTSSSLYSEAIKDSNGGLVISPNAN
KVLADQESAVVLKRASDPKGSEDQLEVVGLQRKTPSSSSVYSQDAMDDLEEELRPCPPCW
YKCSDIFLKWNCCVPWVTFKKWMYFIVMDPFVDLGITICIVLNTMFMAMEHYPMTPAFEE
VLSVGNLVFTGIFTAEMVLKLFAMDPYYYFQVGWNIFDSIIVTMSLVELGLANVEGLSVL
RSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE
CVCKISLDCELPRWHMHDFFHAFLIIFRVLCGEWIETMWECMEVAGQGMCLVVFMMVMVI
GNLVVLNLFLALLLSSFSGDNLAAPEEDGEMNNLQIATSRITRGIDWAKAYVIEQVWIII
GKQPKEDGDGADGNGGSNGDVDGLPKDSLALKNVNSSDNPKADLELKMLDVWIDDVNPSG
FLTNYNLTLDVPIAKMESDDDEDDCSEEEEGEGANGNAKEDTELKKPIAPDNASSICSTV
DNPPEVEEEEEEEADPTSPENCWTEKCIGRCPCLDFDITTGKGKTWWNFRKTCFLIVEHN
YFETFIIFMILMSSGALAFEDIYIEQRRTIKIILEYADQVFTYVFIIEMLLKWVAYGFQA
YFTNAWCWLDFLIVDVSLISLTANILGYAELGPIKSLRTLRALRPLRALSRFEGMRVVVN
ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNTTSEERFSADVVNNKTECFQ
LMEGNDDVRWMNAKVNYDNVGMGYLSLLQIATFKGWMDIMYGAVDSRSVEDQPIYEDNVY
MYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKK
PQKPIPRPQNKFAGLIFDLITQQFFDIFIMVLICLNMVTMMVETDGQSREKEDILFLINL
VFIIVFTTECILKLIGLRQYFFSVGWNIFDFVVVILSIVGLLLADLIEKYFVSPTLFRVI
RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKE
AGIDDMFNFETFGNSIICLFMITTSAGWDGLLSPILNSRPPDCDPDVENPGTDVRGNCGS
PGLGICFFCSYIIMCFLVVVNMYIAIILENFNVATEESGDPLCEEDFEMFYETWEKFDPD
ASQFITYDILSEFCDTLKDPLRIPKPNAIKLITMDLPIVPGDKIHCLDILLALTTEVLGE
SAEMDAMKESMEEKFMANNPSKVSYEPITTTLRRKQEEVAAVVIQRAYRKHLLRRSMKLA
SYKYREKKALTKEDEAPPETEGMIAIRMNKLYGSQQSLGVDDTVVDMDSHEKRESNELTE
TQPPVETAEEPPPVELQNEILLHSAPFVIPVSIRNSQLKESDV
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccctgctccctcccacaggcaccgaagtgtttcgccgcttcacccttgagtcg
ctggcggagatcgagaggcggatggccgaggaagcagaggagcaggagagaaaaaaggcc
ctgaacattgaggtggcagaggaggacctgccaaagccagccgtcgacctggaggccggc
aaggccctgccattcatctacggagacccgccacctgagctgttcaacacgcccctggag
gaactggatcctttctacaaatcacacaaaacctttattgtcatcaccaaagggaataca
atattcaggttcaatgctgagcctgcctgctatattctaacacccttcagtattctcagg
agaggatccatcaaaattctcatacattcattatttagcatgttcatcatgttaacgatc
atgtccaactgtgtgttcatgacgatgagtgaccctccggcatggagtaaaactgttgaa
tatgttttcactggtatctataccgttgaggcaacagttaaagtgttttccagaggcttc
tgtgttggagatttcacattccttcgagatccatggaactggttggattttatggtgatc
agcatggcgtacctcacagagttcgttgacctgggcaacgtgtctgccctcaggacgttc
cgtgtgctccgagccctaaaaacaatcactgtaattcccggtctgaaaaccattgtgggc
gctttgatccagtcggtgaagaagctggctgatgtgatgatcctgacagtgttctgcctg
gctgtgttcgctctggtcggccttcaactgttcatgggaaacctgaagcagaagtgtgtt
tactggccccctgtggaatggcgtttgaactctaccgacatggacaacatcactatggcc
ttcaacgacaccgatggttttaatgacgtcacgggctacagtggcacaaacagcagcaac
agcacgtgggacttcaaggcgtacatcgacgataaagtgaaccattacttccttcctgga
atgttagaccctcttctttgtggaaacgcttctgatgctggaaattgccctgaaggatac
acgtgtatgaaggccggagggaatcccaactatggatacacaagctacgacagttttgga
tgggcctaccttgccctatttcggcttatgacacaggacttctgggaaaatctattccag
ctgactcttcgctcagcagggaaaacctatatgattttctttgtggtggtgatcttcctg
ggctcgttctacctgatcaacctgatcctggctgtggtggccatggcgtatgcggagcag
aacgaggccaccatggccgaggccaaggagaaggaggaggagtacgccatgatcatggtg
cagctgaaggaaaggagagaagcggaggtcaaagagagacatgacaggcatcatgaacac
catgaacacgctgaagttgctggcagtcagacgtcactgtccagtagaacgtctaagaaa
gagaaaggtgaaatggcagatcaagaggtcgctgatgatgaggcgtgtacgtcctccagc
ctttatagcgaggctataaaggactccaacggaggcctcgtgatcagtcccaacgccaac
aaggtcctggcagaccaggagtctgctgttgtgttgaagagggccagtgatcccaagggg
agcgaggaccagctggaagtagtaggcctgcagaggaagacacccagttcatccagtgtt
tacagccaagatgccatggacgatttggaggaggaactgagaccttgtccgccttgctgg
tacaagtgttcagacatattcctgaaatggaactgctgtgtgccctgggtgactttcaag
aagtggatgtacttcatagtgatggacccattcgtggacttgggtatcaccatctgcatt
gtgctcaacaccatgttcatggccatggagcactaccccatgacaccagcgtttgaagaa
gtgctgagtgtggggaacttggtcttcacaggaatcttcacagcagagatggtgctgaag
ctcttcgccatggatccgtactactacttccaggtcgggtggaacatcttcgacagcatc
attgtgacaatgagcctggtggagctggggctggccaacgtcgagggtctgtccgtgctc
cgttccttccgtctgatgcgtgttttcaagctggccaaatcctggcccacactcaacatg
ctaatcaagatcatcggtaattcagtgggcgcactgggtaacctcaccctggtcctggcc
atcatcgtcttcatcttcgccgtggtgggcatgcagctcttcggcaagaactacaaagag
tgtgtctgcaagatctccttggactgcgagctgccccgctggcacatgcatgacttcttt
cacgcttttctcatcatcttccgggtgctgtgcggagagtggatcgagaccatgtgggag
tgcatggaggtggccggacagggcatgtgtctcgtcgtcttcatgatggtcatggtcatc
ggtaacctagtggtgttgaacctcttcttggccttgctgctgagctcgttcagcggtgac
aacctggcggctccagaggaggacggggagatgaacaacctgcagatcgccaccagcagg
atcaccaggggcatcgactgggccaaggcctacgtcatcgagcaggtctggatcatcatc
gggaagcagcctaaggaggatggagacggggctgacggtaatgggggtagtaacggggat
gtggacggcctcccaaaggatagcttggctttgaaaaatgtaaactccagtgacaaccca
aaagctgatttagagcttaaaatgctggacgtttggatagacgacgttaacccaagtgga
tttcttacaaattacaatttgaccctggatgtgcctattgccaaaatggagtcggatgat
gacgaggatgactgctctgaagaggaagaaggagaaggcgcaaatggaaacgctaaagag
gatactgagttaaagaaacctattgcaccggacaacgcctcttcaatatgcagcacagtg
gacaatccccctgaagtggaggaagaggaggaagaagaggcagaccccaccagccctgag
aactgctggaccgagaaatgcattgggcgatgcccttgccttgattttgacatcaccacg
ggcaaagggaagacttggtggaacttcaggaagacatgcttcctcattgtggagcacaac
tacttcgagaccttcatcatcttcatgatcctgatgagtagtggagctttggcttttgaa
gacatatacattgaacagcgcaggaccataaaaatcatcctggaatatgctgatcaagtc
ttcacctacgtgttcattattgagatgctcctgaagtgggtggcttacggattccaggcc
tacttcacaaacgcatggtgctggctggacttcctcattgtggatgtgtctttgattagc
ttaacggctaacatcctgggctatgctgaacttggaccaatcaaatctcttcgaacttta
agggctttgcggcccctccgcgccctgtccagatttgagggaatgagggtggtggtgaac
gctctggtgggggccattccttccatcttcaacgtgcttctagtgtgcctcatcttctgg
ctcatcttcagcatcatgggagtcaacctgtttgctgggaagtactactactgcttcaac
accacgtctgaggagaggttctctgctgacgttgtgaacaacaagaccgaatgcttccag
ctaatggagggtaatgacgacgtgcgctggatgaacgcaaaggtcaactatgacaacgtg
ggcatgggctacctctccctcctgcaaatagcaacgtttaaaggatggatggatataatg
tatggcgctgtggattcacgttctgtggaagaccagcccatatatgaggataatgtttac
atgtacatctactttgtcatattcatcatctttgggtccttcttcaccctgaatctcttc
atcggtgtcattatcgacaacttcaaccaacagaaaaagaagtttggagggaaagacatt
ttcatgacagaggaacagaagaaatactacaatgccatgaaaaagcttggttccaagaag
ccacagaaacccattcccagaccccagaacaaattcgcaggccttattttcgacctgatc
acccaacaattcttcgacatcttcatcatggtgctgatctgcctcaacatggtaacgatg
atggtggagacggacggccagagcagggagaaggaggatatactcttcctcatcaacctg
gtgtttatcatcgtcttcaccacagagtgtatcctcaagttgatcggactgcggcaatat
ttcttttccgtcggctggaatatttttgattttgtcgtagtcattctctccatcgttggt
ttactgctggcggacctcatagagaagtattttgtctcacctacccttttccgtgtcata
agactggccaggattggtcgagttctgagactcatccgaggagctaaaggcatccggaca
ctgttgtttgccctgatgatgtcacttcctgctctcttcaacattgggctcctgctcttc
ctcatcatgtttatcttctccattttcggaatgtccaactttgcgtatgtcaagaaggag
gccggaatagacgatatgttcaattttgaaacttttggcaacagtataatttgtctgttc
atgatcacaacctcagccggttgggatggtctcctctcacccattctgaatagtagacct
ccggactgtgacccggacgtggaaaatcccggcacagatgtaagaggcaactgcggcagc
cctggtttgggaatttgttttttctgcagctacatcatcatgtgtttccttgttgtggtc
aacatgtacattgccattattctcgagaacttcaatgtggccacagaggagagtggcgac
ccgctgtgtgaggaagacttcgagatgttctacgagacctgggagaagttcgaccctgac
gcgtcacaattcatcacctatgacattttgtcggagttctgtgacacgcttaaagacccg
ctcaggatccccaaacccaacgcaatcaagctgatcaccatggaccttcccattgtccct
ggggataagatccactgtctggacattctgctggcgctgaccacagaggtgctgggagag
tcagcggagatggatgccatgaaagaaagcatggaggagaagttcatggccaacaacccc
tctaaagtgtcatacgagccaatcaccaccaccctgaggcgaaagcaggaggaggtagca
gctgttgttattcagagagcctatcgtaagcatctgctgagacgttcgatgaaactcgct
tcctacaagtaccgcgagaagaaagcgttaaccaaggaggacgaagcgccgccagagacg
gagggaatgattgccatcaggatgaacaaactgtatggaagccaacaatccctcggagtg
gatgacaccgttgtagatatggattctcatgaaaaacgggagagcaacgaactgacagag
acacaacctcctgtggagaccgctgaagagccgccgcctgtggagcttcagaacgagatc
ctcttgcactctgccccctttgtcatccctgtctcaatccgtaactcacagctgaaagag
tccgatgtttga
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