Candidatus Syntrophocurvum alkaliphilum: SYNTR_2013
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Entry
SYNTR_2013 CDS
T06326
Name
(GenBank) DNA polymerase III beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
salq
Candidatus Syntrophocurvum alkaliphilum
Pathway
salq03030
DNA replication
salq03430
Mismatch repair
salq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SYNTR_2013
03430 Mismatch repair
SYNTR_2013
03440 Homologous recombination
SYNTR_2013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salq03032
]
SYNTR_2013
03400 DNA repair and recombination proteins [BR:
salq03400
]
SYNTR_2013
Enzymes [BR:
salq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SYNTR_2013
DNA replication proteins [BR:
salq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SYNTR_2013
DNA repair and recombination proteins [BR:
salq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SYNTR_2013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
HobA
Motif
Other DBs
NCBI-ProteinID:
QGU00607
UniProt:
A0A6I6DL56
LinkDB
All DBs
Position
complement(2073215..2074354)
Genome browser
AA seq
379 aa
AA seq
DB search
MKFTINKKHLSYLTSLVHRAASNKNTVAALSGLLIEISSNHGLTMTATDMEIGIKASTKE
INIIEEGSVLVNAYYFADFIKLLPDTTISIEFNNNSSKLNISYGRSSGVINTYSIQEYPE
LPLKEMEYKFTLPQNVLKEALKKTVFAATNNHFRQVFTGVLFDIIENNQINIVASDTHRL
AFYNYTLENINLEPFNFIIPIRSVNELLRLLDDTDDDIKIGFSENNVIFYNDNFIILSRL
IEGKYPNYDQVIPKNFNTKVLLKTDILSNSLERAKTMPTDDKLKIQHAQFTFKEDEISIN
SFSETIGEIVEIIEEFNLEGDNDIKIAFNTNYLLDVVKLLDNETKEISISLSGSLGPSLI
KNPDKNNYLYILVPLRTTG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatttacaataaacaaaaaacatttatcttatttaacaagtcttgtacatagagca
gcatctaataaaaatactgtagctgcattatcaggtttacttattgaaataagcagtaat
catggtttaactatgactgcaactgatatggaaattggcattaaagcttcaactaaagaa
ataaatataatagaagaaggctctgttttagtaaatgcctattactttgcagatttcata
aaattattacccgatacaactatttcgatagaatttaacaataattcttcaaagttaaat
atatcttatggtagatcatcaggagttataaacacatatagtatacaagaatatcctgaa
ctacctcttaaagaaatggaatataaatttactcttcctcaaaatgtattaaaagaagca
ttgaaaaaaacagtctttgcagctacaaataatcattttagacaagtatttacaggtgtt
ctttttgatataattgagaataaccaaattaatattgtagcttcagatacacatagacta
gctttttacaactatactctcgaaaatataaatttagaaccttttaattttataattcca
ataagatctgttaacgaacttttaagactacttgacgatactgatgatgatataaaaata
ggtttttcagaaaacaatgtaatattttataacgataatttcataattttatcccgatta
atagaaggaaaatatcctaattacgatcaggtgatcccaaaaaattttaatactaaagta
ttattgaaaactgatattttaagtaatagtctagaaagagcaaaaacaatgccaactgat
gataaattaaaaattcaacatgcccagttcacttttaaagaagatgaaatatctattaac
tctttttcagaaacaattggagaaattgtagaaatcatagaagaatttaacttggaagga
gataatgatattaaaatagcttttaatactaattatttgttagatgtagtaaaattatta
gataatgaaacaaaagaaatatcgataagtctttctggttctctaggcccttcattaata
aaaaatcctgataaaaataattatttatatatattagtacctcttcgtactacaggttaa
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