Salinivibrio sp. YCSC6: E8E00_00085
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Entry
E8E00_00085 CDS
T05946
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
saly
Salinivibrio sp. YCSC6
Pathway
saly00071
Fatty acid degradation
saly00280
Valine, leucine and isoleucine degradation
saly00310
Lysine degradation
saly00362
Benzoate degradation
saly00380
Tryptophan metabolism
saly00410
beta-Alanine metabolism
saly00640
Propanoate metabolism
saly00650
Butanoate metabolism
saly00907
Pinene, camphor and geraniol degradation
saly00930
Caprolactam degradation
saly01100
Metabolic pathways
saly01110
Biosynthesis of secondary metabolites
saly01120
Microbial metabolism in diverse environments
saly01200
Carbon metabolism
saly01212
Fatty acid metabolism
Module
saly_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
E8E00_00085 (fadB)
00650 Butanoate metabolism
E8E00_00085 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
E8E00_00085 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
E8E00_00085 (fadB)
00310 Lysine degradation
E8E00_00085 (fadB)
00380 Tryptophan metabolism
E8E00_00085 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
E8E00_00085 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
E8E00_00085 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
E8E00_00085 (fadB)
00930 Caprolactam degradation
E8E00_00085 (fadB)
Enzymes [BR:
saly01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
E8E00_00085 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
E8E00_00085 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
E8E00_00085 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
E8E00_00085 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QCF34719
LinkDB
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Position
I:complement(18162..20339)
Genome browser
AA seq
725 aa
AA seq
DB search
MIYQGDNLSVRALDNGIAELTLDSQGSVNKLDLATLESLNEALEALAGQDIKGLLLTSAK
SAFIVGADITEFLGLFAKPDQELSDWVARANAIFNRLEDLPFPTISAINGHALGGGCECV
LATDLRVASTDARIGLPETKLGIMPGFGGTVRLPRLVGADTAMELITAGKDKRASAALKE
GLVDAVVESDKLRDAAIAMLTQAIEGKIDWQTRRHQKQQPLALNRTEAAMSFTMAKGMVA
QVAGKHYPAPMAAVKAIEEAASLGRDEALEVENRYFVKLAKTDVAKALVGIFLNDQVIKG
NAKKAAKQGKDTQRGAVLGAGIMGGGIAYQSALKGVPVMMKDIAPQSLELGMTEATKLLN
KQLSRGRIDGFKMGQVLSSITPSLHYAGIEHSDVVVEAVVENPKIKASVLKEVEALVSDD
TVIASNTSTIPINTLAKSLARPENFCGMHFFNPVHRMPLVEVIRGEKTSDETIARVVAYA
AKMGKSPVVVNDCPGFFVNRVLFPYFHAFSLLLRDGVDFQRIDKIMEKQFGWPMGPAYLL
DVVGIDTAHHAQAVMAEGFPDRMSKSGRDAIDVMYEAERFGQKNGKGFYRYTTDKKGKPK
KEADEAVPALLAPVIEGGQAEISDEDIIARMMVPMINEVARCLEENIIASPAEADIALVY
GIGFPPFRGGAFRYVDTLGVENYVAMAEKLADLGALYHVPADMKRRAGDKQAYFDVTPVN
APQSA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaggagataacctttcagttcgtgcattggataacggcattgcagaactg
acgctggacagccaaggttctgtcaacaaactggatcttgcaacgctagaaagcttaaac
gaagcgctggaagcgcttgcgggccaagacattaaaggcttattactcacctcagccaaa
tcagcctttattgtaggcgcggatatcacagaatttctcggcctgtttgccaagccagat
caggaactgtctgactgggtggcacgtgctaacgctatttttaaccgcttggaagaccta
cctttcccaacgatcagtgccattaatggccatgctcttggcggtggttgtgagtgcgta
ctcgccactgacttacgcgtggcgagcactgacgcccgtatcggtctacccgaaaccaaa
ctcggtattatgccgggctttggagggaccgttcgtttgccacgtcttgtcggcgcagat
accgcaatggagctgattaccgcaggaaaagacaagcgcgccagtgctgcgctgaaagaa
ggactggtcgacgcggtggtagagagcgacaaactgcgtgatgccgcgatagccatgctt
actcaagccattgaaggcaagattgattggcaaacccgccgccatcaaaaacaacaacct
ttagcccttaatcgcaccgaagcggcgatgagctttaccatggccaaaggcatggtcgct
caggttgctggtaagcattatcccgctccgatggcggccgttaaggcgatagaagaagcc
gcaagccttggacgtgatgaggcgcttgaggttgagaaccgttactttgttaaattggcc
aagactgacgttgccaaagcccttgtgggcattttcctcaatgaccaagtcattaagggc
aatgcaaagaaagcagccaaacaaggtaaagatacgcagcgtggagctgtgctcggcgca
ggcatcatgggcggcggtatcgcgtatcaatccgcgctgaaaggcgtgccggtaatgatg
aaagacatcgcgcctcagtcattggagctgggcatgacggaagcgaccaagttgttgaat
aagcaacttagccgcggtcgcattgatggctttaaaatgggccaagtgctgtcatcaatc
actccaagcctccactatgcgggcattgagcacagcgatgtcgtggtcgaggctgtggtc
gagaacccgaaaatcaaagcgagcgtactcaaagaagtggaagcgctagtcagtgacgat
acggtgattgcctctaatacctccaccattccaattaacaccctcgccaagtctttggcc
cgcccagaaaacttctgtggcatgcacttctttaacccggttcatcgcatgccattagtg
gaagtgattcgtggcgagaaaacctctgatgaaaccatcgcgcgcgtggtggcttatgcc
gccaagatgggtaaatcgcccgtggtcgtcaacgactgccccggctttttcgtcaaccgc
gtattgttcccctacttccatgcctttagcttgctactgcgtgacggagtggacttccag
cgcattgacaaaatcatggaaaaacaatttggctggcctatgggccctgcttatctgctt
gatgtggttggtatcgataccgcacatcatgctcaggcagtgatggcagaaggcttccca
gaccgtatgagtaaatctggccgtgatgccattgatgtgatgtatgaggccgagcgcttt
ggtcagaaaaatggcaaaggcttctatcgctacaccacagacaaaaaaggcaagccgaaa
aaagaagccgatgaagcagtccctgcgttgctcgcccccgtgattgaaggtggtcaagca
gagatcagtgacgaggatattatcgctcgtatgatggtgccgatgatcaacgaagtcgcc
cgctgcttggaagaaaacatcattgcctctccggcagaagcagacattgctttggtttac
ggtatcggcttccctccattccgaggcggtgctttccgctacgtggataccttgggtgtc
gaaaactatgtcgccatggcagaaaagttggcggatctcggtgccttgtatcacgtcccc
gctgatatgaaacgtcgagctggcgacaaacaggcttattttgatgttacaccggtcaac
gcaccgcaatcagcctaa
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