Salinivibrio sp. YCSC6: E8E00_08405
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Entry
E8E00_08405 CDS
T05946
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
saly
Salinivibrio sp. YCSC6
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saly03032
]
E8E00_08405 (gyrA)
03400 DNA repair and recombination proteins [BR:
saly03400
]
E8E00_08405 (gyrA)
Enzymes [BR:
saly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E8E00_08405 (gyrA)
DNA replication proteins [BR:
saly03032
]
Prokaryotic type
DNA Topoisomerases
E8E00_08405 (gyrA)
DNA repair and recombination proteins [BR:
saly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E8E00_08405 (gyrA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QCF36185
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Position
I:complement(1828217..1830886)
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AA seq
889 aa
AA seq
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MSDLAKEITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPDVLPTRVPNLLVNGASGIAVGMAT
NIPPHNITEVINGCLAYIDNEDITIDELMEHIPGPDFPTAAMINGRKGIEDAYKTGRGKI
YLRAKAEIEADKHGKETIVVNEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDGM
RIVIECRRDAVAEVVLNNLYAQTQLQTSFGINMVALDNNQPKLFNLKGMLECFVNHRREV
VTRRTVYELRKARERAHILEGLAVALANIDEVIELIRRAPTPAVAKQELQAQGWSLGGVS
AMLEAAGVDSARPEWLAPEFGARDDGSYYLTEQQAQAILDLRLHKLTGLEHDKILDEYKS
LLEQIAELMHILASTERLMEVIREELEAIRDSYGDKRLTEITAASADIDIEDLINEEDVI
VTWSHEGYVKYQALSDYEAQRRGGKGKSATRMKDEDFIERLLVANTHDTILCFSTRGRMY
WLKVYQLPHASRNARGKPIVNLLPLEDDERITTILPVREYAEDKYVFMATAHGTVKKTPL
TDFSRPRSAGIIAVNLREGDSLIGAQLTDDNSEVMLFSQFGKVVRFVASNETVRAMGRTA
AGVRGIQLAEKDQVVSLIVPQSDGDILTVTENGFGKRTALEEYPTKSRATKGVVSIKVSE
RNGDVVGAIQVCTGDELMLITNAGTLVRTRAEEVSQVGRNTQGVRLIRVSDDEKVVGLQR
IEEPDEEEMEALANEAAANANATSDAPASESSSEDNDDTPSETDSDQDA
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcttgctaaagagatcacgccagtcaatatcgaagaggagctgaaaagctcg
tatctcgactatgcaatgtctgtcattgttggccgagctcttcctgacgtgcgtgatggc
ctaaagccagtacaccgccgcgttttattcgcgatgaatgtacttggcaacgactggaac
aagccatataaaaaatcggcccgtgtggtcggtgacgtaatcggtaaataccacccacac
ggtgatagcgcggtttacgacactattgttcgtatggcgcagcctttctcactgcgttat
atgttggtggatggccaaggtaactttggctccattgatggtgactcggccgcggcgatg
cgttacaccgaagtgcgcatggcaaaaattgcccatgagctcctcgcggatctagataaa
gaaacagtggactacgtacctaactatgacggtacggagcaaatccctgatgttttaccg
acgcgcgtgcctaacttgttagtgaatggcgcctctggtatcgcggtggggatggcaacc
aacatcccacctcataatatcaccgaagtgatcaacggctgtctggcgtatatcgataac
gaagatatcaccatcgatgagctgatggagcacattccgggtcctgatttcccgaccgcg
gcgatgatcaacggccgtaaaggcatcgaagatgcttataagaccggtcgcggcaaaatc
tatctacgtgcgaaggcggagatcgaagcggataaacatggtaaagaaaccattgttgtc
aatgagatcccgtatcaagttaacaaagcgcgcctgattgaaaagattgctgagcttgtc
aaagataagaaaattgaaggcatttcagcgctgcgtgacgagtcagataaagacgggatg
cggattgtgatcgaatgtcgccgcgacgcggtggcagaagtcgttctcaacaacctgtat
gcccagactcagttgcaaacgtcgtttggtatcaacatggtggcgctggataacaaccag
ccaaaactcttcaacctcaaagggatgttggagtgttttgtcaatcaccgccgtgaagtg
gtcacgcgtcgtaccgtgtatgaattacgcaaagcgcgtgagcgtgcacacatccttgaa
ggtctagcggttgcgctggctaacatcgatgaagtgatcgagcttattcgccgagcgccg
accccagcagttgccaaacaagagctacaagcacaaggctggagcttaggtggcgtgtct
gccatgttggaagcggcgggtgttgattctgcacgccctgagtggttagcgcctgagttt
ggtgcacgtgatgacggttcctactatctgactgagcaacaagcgcaagcgattctggat
ttgcgtctgcataagctgactgggctcgagcacgacaagatccttgatgaatacaaatcg
ctgctggaacaaattgctgaattaatgcatatcttggccagcaccgagcgtttgatggaa
gtgatccgcgaagagcttgaggcgattcgtgatagttatggcgataagcgcctgactgag
atcacggcggcaagcgctgacattgatatcgaagatctgatcaacgaagaagatgtcatc
gtgacatggtcacacgagggatatgtgaaatatcaagccttgagtgactatgaagcgcag
cgtcgcggtggtaaaggtaaatcagccacgcgcatgaaagatgaagacttcattgagcgt
ctgttggtagcaaatacgcacgacactatcttgtgcttctcaacacgtggccgcatgtac
tggttgaaagtgtatcaactgccacatgcgtcgcgtaacgcacgcggtaaaccgatcgtc
aacttgctgccattggaagacgatgagcggataaccactattctgccggttcgtgaatat
gcagaagacaaatacgtcttcatggccactgcgcacggcaccgtgaagaaaaccccgctg
actgactttagccgtccacgcagcgcgggcattattgccgtgaacctgcgtgagggtgat
agcctcattggcgcgcagctgactgatgataacagcgaagtcatgctgttctcgcaattc
ggtaaagtggtgcgctttgtggcgtctaacgagacagtacgggcaatgggccgtaccgcg
gcaggtgtccgcgggattcagctcgcagagaaagaccaagttgtttccctgattgtgccg
cagtcggatggtgacatcctgacggtgacagagaacggctttggtaaacgtacggcgctg
gaagaatatccaacgaagagccgtgcgaccaagggtgtggtctcgattaaagtctctgag
cgtaatggtgacgttgtcggtgccatccaggtatgcaccggtgatgaactgatgttaatc
accaatgccggtaccctggtacgtacccgcgcggaagaagtcagccaagtgggccgtaat
acccaaggcgtacgactgatccgcgtcagtgatgatgaaaaagtggttggtcttcagcgt
atcgaagagccggatgaagaggaaatggaagcactggctaacgaagcggcggcaaatgcc
aatgcaaccagtgacgcaccagcctctgagagcagctctgaggacaatgatgacacaccg
agtgagacggatagcgatcaagacgcttaa
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