KEGG   Streptomyces ambofaciens: SAM23877_5465
Entry
SAM23877_5465     CDS       T04055                                 
Symbol
lhr
Name
(GenBank) putative ATP-dependent helicase lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
samb  Streptomyces ambofaciens
Brite
KEGG Orthology (KO) [BR:samb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:samb03400]
    SAM23877_5465 (lhr)
Enzymes [BR:samb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SAM23877_5465 (lhr)
    5.6.2.6  RNA 3'-5' helicase
     SAM23877_5465 (lhr)
DNA repair and recombination proteins [BR:samb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SAM23877_5465 (lhr)
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr DEAD WH4_Lhr WH2_Lhr Helicase_C ResIII DUF6406 AAA_25 PhoH
Other DBs
NCBI-ProteinID: AKZ58510
UniProt: A0A0K2AZI0
LinkDB
Position
complement(5828713..5833791)
AA seq 1692 aa
MVSSAHRALDGFSPATRGWFTGAFSAPTAAQAGTWKAISRGSDVLVVAPTGSGKTLAAFL
AALDQLASTPPPADPKKRCRVLYVSPLKALAVDVERNLRSPLTGIRQESVRLGLPEPEVK
VGIRSGDTPAAERRALSTRPPDILITTPESLFLMLTSATREALTGIETVILDEVHAVAGT
KRGAHLALTLERLDELLPKPARRIGLSATVRPVDEVARFLAPRGKVEIVQPASGKEFDLS
VVVPVEDLAELGGSPVADGNEGAERPSIWPHVEERITDLVQSHRSTIVFANSRRLAERLC
NRLNEIAYERATGESLEEHHSPAELMGGSGAAQGAPSVIARAHHGSVSKEQRALVEEDLK
AGRLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAVSTGVVFPKY
RGDLVQAAVVTERMRSGAIEALRVPANPLDVLAQQIVAMTALDSWQVDDLLATVRRAAPF
ASLPESAFTAVLDMLAGRYPSDAFAELRPRVVWDRVTGTVTGRPGAQRLAVTSGGTIPDR
GLFGVFLAGADPKKGGGRVGELDEEMVYESRVGDVFTLGTSSWRIEDITRDRVLVSPAPG
VPGRLPFWKGDQLGRPLELGRALGAFLREVGSLTEEDARLRLVTAGLDAWAADNVLAYLD
EQREACGHIPDDRTIVVERFRDELGDWRVVVHSPFGAQVHAPWALALGARLTERYGMDAQ
VMHADDGIVLRLPDADLMSLDLLDGEPAKPGLEYDAEQAPVGAGDVVFDKGEVDRVVTDQ
VGGSALFASRFRECAARALLLPRRSPGKRTPLWQQRQRAAQLLEVASEYGSFPIVLEAVR
ECLQDVFDVPGLVELMGDLESRKVRLVEVTTPEPSPFARSLLFGYVAQFLYEGDSPLAER
RAAALSLDSRLLAELLGQAELRELLDAEVLTELERELQWLTEDRRAKDSESVADLLRLLG
PLTDAELTERGAEPHWAQELAAARRAIRVRIAGADHWAAIEDAGRLRDALGTALPVGVPE
AFTEPVKDPLGDLLARYARTHGPFTSVTAAARFGLGVAVTEGALQRLAAAGRVVQGEFHP
AGIGQEWCDATVLRRLRRRSLAALRHELEPVPPAALGQFLPQWQHIGKGHALRGIDGLVR
AVEQLQGASVPASALEKLVLPSRVANYSPAMLDELTAAGEVVWAGAGSLPGKDGWVSLYL
ADAAPLLLPPPHPLETTALHESVLSSLSGGYGLFFRQIADQVRATTHPEATDPQLADALW
ELAWSGRLTNDTLAPLRSLLGSGRTAGSTAHRAKRGVPRGRYGSLTAAARTASRTGPPTV
AGRWSLLPDREADATVRAHALARALLDRHGVVTRGAVAAEGVEGGFSAVYRILAAFEESG
QARRGYVVEGLGAAQFAMEGAVDRLRAVANARDRGEASPERPDFSGGLPGPTARDGSDWS
GGSNESYGADGSRGADRADRADGTDGAGADGADWSGDPARGDFPFDDFPFGGDAGTGAPG
RSGDASTPPRQRPSTRDDYVSPRDYADPGAGGPRGGGAQGGYGGPRGSFATGFPGRRDRL
STGPRAVVLAAADPANAYGAALTWPEPPAGATHKPGRKAGSLVVLVEGEPVLYMERGGKT
LLLWPSDPDASPGDDLRLRAAAEALGTAARAGSLGTVTVERVNGTAALTSPFGPLLEEAG
FIATPRGLRIRA
NT seq 5079 nt   +upstreamnt  +downstreamnt
atggtcagctccgcacaccgagccctggacggcttctcccccgcgacccgcggttggttc
acgggtgccttctccgcgcccaccgccgcccaggcgggcacctggaaggcgatctcgcgg
ggctcggacgtgctggtggtcgccccgaccggctccggcaagacactggccgccttcctc
gccgccctggaccagctggcctcgacgcccccgccggccgaccccaagaagcgctgccgc
gtcctgtacgtctcgccgctcaaggcgttggccgtcgacgtcgagcgcaatctccgcagc
ccgctgaccggcatccgccaggaatccgtccgtctgggcctgcccgagcccgaggtcaag
gtcggcatccgctcgggtgacaccccggccgccgagcgccgcgccctctccacccgcccg
ccggacatcctgatcaccactccggagtccctgttcctcatgctgacgtcggccacgcgc
gaagcgctgaccggcatcgagacggtgatcctggacgaggtgcacgccgtcgcgggcacc
aagcgcggcgcccacctcgcgctcaccctggagcggctggacgagttgctgccgaagccc
gcccggcgcatcggcctctcggcgacggtccggccggtggacgaggtcgcacgcttcctc
gccccgcgcggcaaggtggagatcgtccagccggcctcgggcaaggagttcgacctctcc
gtggtggtcccggtcgaggacctggccgagctgggcggctccccggtcgccgacggcaac
gagggcgcggagcgcccgtcgatctggccgcacgtcgaggagcggatcaccgacctcgtc
cagtcgcaccgctcgaccatcgtcttcgccaactcccggcgcctggccgagcgcctgtgc
aaccggctcaacgagatcgcgtacgagcgtgcgaccggcgagtccctggaagagcaccac
tcccccgccgagctcatgggcggctcgggagccgcgcagggcgccccctcggtgatcgcc
cgcgcccaccacggatcggtctccaaggagcagcgcgccctggtcgaggaggatctgaag
gcgggccgtctgccggcggtcgtcgccacctccagtctcgagctgggcatcgacatgggc
gccgtcgacctcgtcgtccaggtcgagtcaccgccctcggtcgcctccggtctccagcgc
gtcggccgcgcgggccaccaggtcggcgccgtgtccacgggcgtcgtgttccccaagtac
cgcggcgacctggtgcaggccgccgtggtcaccgagcggatgcgcagcggtgccatcgag
gccctcagggtccccgccaacccgctggacgtcctggcccagcagatcgtggccatgacc
gcgctggactcctggcaggtcgacgacctgctcgccaccgtccgccgcgccgccccgttc
gcctcactgccggaatccgccttcaccgccgtcctggacatgctcgcgggacgctatccg
tccgacgccttcgccgagctgcgcccgcgcgtggtgtgggaccgggtcaccggcaccgtc
accggccgcccgggcgcgcagcgcctcgccgtcacctcgggcggcacgatccccgaccgc
ggcctcttcggggtcttcctcgccggcgccgacccgaagaagggcggcggccgggtcggc
gagctcgacgaggagatggtctacgagtcccgcgtgggcgacgtcttcaccctcggcacc
agttcctggcgcatcgaggacatcacccgcgaccgcgtcctggtctcccccgccccgggc
gtgccgggacggctgccgttctggaagggcgaccagttgggccgccccctggagctgggc
agggccctgggcgcgttcctgcgcgaggtcggctccctcaccgaggaggacgcccggctc
cgcctggtcaccgcgggcctggacgcctgggccgcggacaacgtcctggcgtatctcgac
gaacagcgcgaagcctgcggccacatccccgacgaccgcaccatcgtcgtggagcgtttc
cgggacgagctgggcgactggcgggtcgtggtccactcccccttcggagcccaggtgcac
gccccctgggccctcgcgctcggcgccaggctgaccgagcggtacggcatggacgcccag
gtcatgcatgccgacgacgggatcgtgctgcgtctgccggacgccgacctgatgagcctg
gacctgctcgacggtgaaccggcgaagcccggcctggagtacgacgccgagcaggcgccc
gtcggcgcgggcgacgtggtcttcgacaagggcgaggtcgaccgtgtcgtcaccgaccag
gtgggaggctcggccctgttcgcgtcccgcttccgcgagtgcgccgcccgcgcgctgctg
ctgccgcgccgcagccccggcaagcggaccccgctgtggcagcagcgccagcgcgccgcc
cagttgctggaggtcgcgagcgagtacggctcgttccccatcgtcctggaggcggtccgc
gagtgcctccaggacgtcttcgacgtccccggcctggtcgagctgatgggcgacctggag
tcccgcaaggtgcgcctggtcgaggtcaccacgcccgagccgtccccgttcgcccgctcc
ctgctcttcggatacgtcgcccagttcctgtacgagggcgactcgccgctcgccgagcgc
cgtgccgccgccctctccctggactcacggctgctcgccgagctgctcggtcaggcggag
ctgcgggagctgctcgacgcggaggtgctcaccgagctggagcgcgagctgcagtggctc
accgaggaccgccgcgccaaggactcggagagcgtcgcggacctgttgcgcctgctcggc
ccgctcacggacgccgagctcaccgagcggggcgcagaaccgcactgggcgcaggagctg
gccgccgcccgccgggcgatccgggtgcgcatcgccggtgccgaccactgggcggccatc
gaggacgcgggccggctgcgcgacgcgctgggcaccgcgctgcccgtcggcgtgcccgag
gcgttcaccgaaccggtgaaggacccgctcggcgacctgctcgcccgatacgcccgcacc
cacggccccttcacgtcggtcaccgcggcggcacgcttcggcctgggcgtcgcggtgacc
gagggcgccctgcaacggctcgccgcggcggggcgggtcgtgcagggcgagttccatccg
gccgggatcggccaggagtggtgcgacgcgacggtcctgcgcaggctgcggcgccgctcc
ctggccgcgctgcgacacgagctggagccggtgccgccggccgcgctgggccagttcctg
ccccagtggcagcacatcggcaaggggcacgccttgcgcgggatcgacggtctcgtccgg
gccgtcgagcagctgcagggcgcctccgtgcccgcctcagccctggagaagctggtcctg
ccctcccgcgtggcgaactacagcccggcgatgctggacgagctcacggccgccggcgaa
gtggtgtgggcgggagccggttcgctccccgggaaggacggctgggtgtcgctctacctc
gcggacgccgctcccctgctcctgccgcccccgcaccccttggagacgaccgccctccac
gagtccgtcctgagcagtctctcgggcgggtacgggctgttcttccggcagatcgccgac
caagtgcgcgccaccacccacccggaggccaccgatccgcagttggccgacgccctctgg
gagctggcctggtccggccggctgacgaacgacacgctcgcgcccctgcgctccctgctc
ggctccggccgcaccgccgggtccaccgcccaccgggccaagcgcggcgtgcctcgtggg
cgctacggctcgctgacggccgccgcccgcaccgcgtcccgcaccggccccccgaccgtg
gcgggccgctggtcgctgctcccggaccgtgaggccgacgccacggtacgcgcgcacgcc
ctggcccgtgccctcctcgaccggcacggcgtggtgacccgcggtgccgtcgccgcggag
ggcgtcgagggaggcttctccgcggtgtaccgcatcctggccgccttcgaggagagcggg
caggccaggcgcggttacgtcgtggaagggctcggcgcggcgcagttcgccatggagggc
gccgtcgaccggctgcgcgccgtcgcgaacgcccgggaccgcggcgaggcttcacccgaa
cgacccgacttcagcggcggcctccccggccccaccgcccgggacggatccgactggtcc
ggcggttcgaacgagtcctacggggccgacggatcacgcggggctgacagagctgacaga
gctgacgggactgacggggctggggctgacggggccgactggtcaggcgacccggccagg
ggcgacttccccttcgacgacttcccgttcggcggtgacgcgggcaccggcgccccgggc
cgatccggcgacgcgtccacgcccccgcggcagcgcccctccacccgggatgactacgtc
tcccctcgcgactacgcggacccgggcgccgggggaccgcgcggaggcggggcgcagggc
ggctacggcggaccgcggggctcgttcgccaccggcttccccggccgccgcgaccgcctc
tccaccggtccacgggccgtcgtcctggccgccgccgatccggcgaacgcgtacggcgcg
gccctgacctggcccgagcccccggccggtgccacgcacaagccgggccgcaaggccggg
tcgctggtggtgctcgtcgagggtgagccggtgctctacatggagcgcggcggcaagaca
ctgctgctctggccctccgatccggacgcctcccccggtgacgacctccgcctgcgggca
gccgcggaggcgctcggcacggccgcccgcgccgggtccctcggcacggtcacggtggaa
cgcgtcaacggcacggcggccctgacgtcccccttcggccccctcctggaggaagcgggc
ttcatcgccaccccacgcggactgcgcatcagggcctga

DBGET integrated database retrieval system