Sinocyclocheilus anshuiensis: 107669946
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Entry
107669946 CDS
T04917
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04510
Focal adhesion
sanh04512
ECM-receptor interaction
sanh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107669946
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107669946
09142 Cell motility
04820 Cytoskeleton in muscle cells
107669946
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sanh00535
]
107669946
Proteoglycans [BR:
sanh00535
]
Extracellular matrix (ECM) proteoglycans
Others
107669946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
107669946
NCBI-ProteinID:
XP_016317866
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MAPLLSMSRSWVWRRTLAGCLTCVIVFMLLCAPALAQLDLNRLDGDTVCPPMKNGQDDLP
GFDLITQFQLDVIPMRGVRKVEGSTSLQVAYRLDREANFQIPTRLNFPRGFPDEYSFMTT
FRMIKNTVNKVWNIWQVVDEDGLKQAGMRLNGEQQALEFFLTTMEGDVQTVTFPGLSVLF
NTKWHKVMVGVEKELVTLYVDCHPVDQKPIKRKGYVNTEGDTLIGRLDSDPNTSVVFELQ
WMLIHCDPKRAQREGCTELPPSEMYANAEPDPKPIPGPPGPEGLRGPQGEPGRDGRDGIP
GTPGTPGALGSKGDRGEIGLPGQRGLQGPLGPMGPMGPMGPRGPVGERGLPGFPGPAGPP
GPETVGPPGLPGKPGTPGDEGNIGPEGLPGPRGGIGLPGPPGPPGSPGPQGAGNPEGSGE
TQCQTTCPAGPQGMPGLPGMKGHRGLPGVDGVPGTQGEKGERGAAGEPGPPGRPGDDGQR
GPIGFPGTHGDKGDRGPPGFNGIPGPTGPPGSPGVEGIRGRQGHPGPKGDDGAIGAPGEK
GAPGAKGDTGEPGKHGSDGAPGSPGEKGETGLSGAIGVRGIVGIPGLPGKQGLVGPAGQK
GEIGTVGLTGPVGLPGKDGAPGPPGEDGTPGAKGTSGEPGKQGPVGPTGPQGIQGDKGDQ
GLMGPRGIKGHTGHKGDQGPMGPVGPKGSEGDPGVVGEPGVKGDQGPPGIPGIKSERGEK
GQRGATGADGRPGQPGHEGLTGPQGARGLEGERGLSGPPGPRGIPGPKMNDERIREICSA
VVEEHLDAYKKEVAKKPLAIGAPGTPGLIGPPGLPGPAGPAGEAGPRGIMGPKGPQGYYG
LPGKPGAKGDAGQKGDKGDNGIGIPGIPGEPGPQGPAGKPGISKDGQDGARGDAGVPGTP
GTLGARGPPGAPGLCDPSNCFRPQPLYMIGGKRSVNIKGP
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggctcctctcctcagcatgagcaggagctgggtctggcgacggacgctggcgggatgt
ttaacatgtgtgattgtcttcatgttgctctgtgcaccagctctcgctcagctggatttg
aacagattagatggcgacacggtgtgcccacccatgaagaatggacaagatgaccttcca
gggttcgatctgatcacacagtttcagttggatgtcatccccatgaggggcgtcagaaag
gtagaaggatccacatccctccaggtggcatacagactcgaccgagaggccaacttccag
atcccaaccaggctgaattttccaaggggcttcccagatgagtactcctttatgaccacc
ttccgcatgatcaagaacaccgtcaacaaggtgtggaacatctggcaggtggtggatgaa
gacggtttgaagcaggcaggcatgcgtctgaatggagagcagcaggccctggagttcttc
ctcaccactatggaaggagatgtgcagaccgtcaccttcccaggcctttctgtcctcttc
aacactaaatggcacaaagtgatggttggtgtggagaaggagctggtgacactgtacgtg
gactgtcacccagtggaccagaaacccatcaagaggaaaggctatgtcaacacggaggga
gacactctgatcggaagactggattctgatcccaacacctctgtagtgtttgagttgcag
tggatgctgattcactgtgacccaaagagagctcagagagagggctgtacagaacttcct
ccgtcggagatgtatgccaatgctgagccggatcccaagccgatccctggtccccctggt
cctgaggggcttcgtggaccccaaggagaacctggcagagacgggagagatggtattcca
ggcactccgggcactcctggagctctgggcagtaaaggagatcgaggagagattggactg
ccaggacagaggggactgcaggggcccctgggaccaatgggaccgatgggccccatggga
ccacgaggaccagtgggagaaagaggtctccctggtttccctggacctgccggaccccct
ggaccagaaactgttggccctccaggactcccagggaagcctggtactccaggggacgag
ggaaacatcggaccagagggtcttcctggaccaagaggaggaattgggctcccaggccca
ccaggacctccaggatcaccagggccacaaggcgctgggaaccctgagggaagtggggag
actcagtgccagacaacatgtccagctggaccacagggaatgcctggtctgccggggatg
aagggacatcgaggtcttccaggtgtggacggtgtgccaggtacccaaggtgaaaaggga
gagcgaggggccgctggtgagccaggtcctcctggacgtccaggagatgatggtcagcga
ggaccaattggattccctggaactcatggtgataaaggagatcggggtcctcctggattc
aacgggatcccaggacccactggaccaccaggatcaccaggtgttgaaggcatcagaggg
cgacagggacatcctgggcctaaaggagatgatggtgcgattggagccccgggagagaaa
ggagctcctggagccaagggtgacactggtgagccaggaaagcatggatctgatggagca
ccaggatctccaggagagaagggagagacaggtctgtccggagccattggtgtcagagga
attgtgggaattccaggtttaccaggaaaacagggactcgtggggcctgcaggccaaaag
ggtgaaattggcactgtaggactgactggtccagttgggcttcctggtaaagatggagca
cctggaccaccaggagaagatggaactccaggagccaaaggaacctctggtgaaccagga
aagcagggtccagttggcccaacgggcccgcagggaatccagggagataaaggtgaccaa
ggactcatgggccctcgtggaatcaagggtcacacaggtcataaaggagaccagggccca
atgggtcctgttggtcccaaaggaagtgagggagatccaggtgttgtaggagaaccaggc
gtgaagggtgatcaggggcctccgggtattcctggaatcaagagtgagcgtggagagaaa
ggccagagaggagctacaggagctgatggtcgtccaggtcagccaggccacgagggtctg
accggaccacagggagccagaggtctggagggggaacgaggactatcaggaccccctggt
cccagaggtatacctgggcctaagatgaatgacgagaggatccgtgagatttgttcagct
gttgttgaagagcatttagatgcctacaagaaggaagtagccaagaagcctcttgccatt
ggagcccctggaactccaggactcataggaccacctggactaccgggaccagcaggtcct
gctggagaagccggacccagaggaatcatgggccccaaggggcctcaaggatactacggt
cttcctggaaaaccaggagccaaaggtgatgcaggacaaaaaggtgacaagggagataat
ggaattggaattccaggaattcctggagaacccggacctcaaggaccagctggcaagcct
ggcatcagtaaggacggtcaggatggggccagaggagacgccggtgtgcctggaacccca
ggaacccttggagccagaggacctccgggtgcccctggtctttgtgatccttcaaactgc
tttaggcctcaacctctttacatgattggcgggaagaggtctgtcaacatcaagggtcca
tga
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