Sinocyclocheilus anshuiensis: 107669993
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Entry
107669993 CDS
T04917
Name
(RefSeq) collagen alpha-2(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04510
Focal adhesion
sanh04512
ECM-receptor interaction
sanh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107669993
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107669993
09142 Cell motility
04820 Cytoskeleton in muscle cells
107669993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sanh00535
]
107669993
Proteoglycans [BR:
sanh00535
]
Extracellular matrix (ECM) proteoglycans
Others
107669993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
107669993
NCBI-ProteinID:
XP_016317932
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MDRFFIIFRSLVLLQVLCLALSQVTGPPGPQGPLGPPGPAGTPGADGIDGEKGPPGPPGP
AGQKGESGEPGPDGSPGEDGIDGLIGAKGERGPRGNPGPKGQPGPGGPPGRPGPGLPGLP
GAAGPIGLPGQIGTTGPKGDMGSPGAPGLTGPPGKPGPPGKFLGVEEGSADFQCPTNCPP
GPKGPQGLQGVKGHKGRAGVLGDPGSIGKVGVKGEVGISGEQGIPGPPGPQGLRGYPGMV
GPKGETGPPGYKGILGTIGIPGRPGEEGPQGPPGEPGDKGDMGGRGIRGPQGVVGKKGEN
GLPGIDGKDGTPGIPGIKGATGQNGRPGAPGLQGDAGLPGMPGAKGEIGIKGETGTRGLT
GMQGPPGPQGEPGPPGEAGMEGVPGSKGDRGERGPVGPPGIVGLPGSKGERGPMGVPGAQ
GLTGTKGDKGFQGKVGSKGDVGDPGVEGLAGEKGEKGQSGEPGPKGQQGVTGDQGNNGPT
GDPGKPGDQGPAGLPGSRGLHGERGVPGMPGIQGPPGRDAIDQHIIDVVLKMLQEKLAAV
AVSSKRAVLGGAGVMGPPGPPGPPGTPGSQGPHGLPGGRGIPGIIGGPGQIGNTGLKGKR
GAKGERGDPGRPHPGQPGPPGLPGPPGLDGVARDGRPGERGPQGAAGEPGRPGKAGPLGL
PGFCEAAACLAASAYTSPRLQEAGTVKGPST
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggatagattcttcatcatcttcagaagcctggtcctgttgcaggtgctctgcttggcc
ttatcacaagtgaccggtccacccggaccgcagggcccccttggtccccctggccccgct
ggaactcccggtgccgacggcattgatggtgaaaaaggccctcctggacctcctggacca
gcaggtcaaaagggagagtcaggtgagcctggtcctgatggatctccaggggaggatggc
attgatggtttgattggggctaagggtgagaggggccctcgtggtaatcctggaccaaag
ggtcagccagggcctggtggaccaccaggacgacctggacctggactgcctggacttcct
ggagcagcaggccccattgggcttcctggacaaattgggactactgggccaaagggtgac
atgggaagtcctggagctccaggattaaccggacctccaggaaagccaggtccaccagga
aagtttttgggtgtagaggaaggcagtgctgacttccagtgtccaaccaactgtccacct
gggccgaaaggtcctcagggcctacagggagtgaagggacataaaggtcgcgctggggta
ttgggagatccaggaagcatcggaaaagtgggtgtaaagggtgaagtgggcatctccggt
gaacaaggaataccaggccctccaggtccacagggtctgagagggtatccaggaatggtg
gggcccaaaggcgagacgggaccacctggttataaaggaattttaggaacaatcggcatc
cctggacgccctggtgaagaaggaccccaaggaccacctggagagcctggtgacaagggc
gacatgggagggcgtggaatacgaggacctcagggagtggtcggaaagaagggagagaac
ggtcttccaggaattgatggaaaagatggtactcctggcatcccaggaataaagggagct
acaggacaaaatggaagacctggagctcctggtcttcagggagacgctggtttgcctggt
atgcctggagccaagggtgaaattggaattaagggtgagacaggaacccgaggcttgacg
ggaatgcaaggtcctccaggacctcaaggagagcctggtcctccaggtgaagctggcatg
gagggagtcccaggttcaaagggtgacaggggcgaaagaggaccagttgggcctcctggt
attgttggtttgcctggcagtaaaggagagaggggacccatgggcgtcccaggtgctcag
ggtctaactggaactaagggtgacaagggattccaaggcaaagtgggatcaaagggagac
gttggtgatcctggtgtagagggattggctggggagaaaggagagaagggacaatctggg
gagcccggacctaagggacagcaaggtgtgaccggtgatcaagggaacaacggccctacc
ggagatcccggtaaaccaggagaccagggtcctgcaggcttacctggttcacgtggcctg
catggagaaagaggagttccagggatgccaggaatacaaggaccacctggtcgtgatgct
atagatcaacacatcattgacgttgtcctgaagatgcttcaagagaagttagcagcggta
gcggtgagctctaagagagccgtgctgggtggagcaggtgtgatgggccctccaggtcct
ccaggaccacctggaactccaggatctcagggtcctcatggactgccaggcggccgtggc
attcctggcataatcgggggcccaggccagataggaaacactggtcttaaagggaagagg
ggtgcaaagggagagagaggagatcctggacgaccacatcctggccaaccgggaccacct
ggactgccaggtcctccaggtcttgacggtgtggctcgtgacggtaggccaggcgagcga
ggacctcagggtgcagcgggtgagccaggccgtcctggaaaggctggtcctctcggtctt
cctggattttgtgaagcagctgcatgtttggcagcctctgcctacacttctcccagatta
caagaggcaggaacagtaaagggcccatccacttaa
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