KEGG   Sinocyclocheilus anshuiensis: 107669993
Entry
107669993         CDS       T04917                                 
Name
(RefSeq) collagen alpha-2(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh04510  Focal adhesion
sanh04512  ECM-receptor interaction
sanh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107669993
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107669993
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107669993
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:sanh00535]
    107669993
Proteoglycans [BR:sanh00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   107669993
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 107669993
NCBI-ProteinID: XP_016317932
LinkDB
Position
Unknown
AA seq 691 aa
MDRFFIIFRSLVLLQVLCLALSQVTGPPGPQGPLGPPGPAGTPGADGIDGEKGPPGPPGP
AGQKGESGEPGPDGSPGEDGIDGLIGAKGERGPRGNPGPKGQPGPGGPPGRPGPGLPGLP
GAAGPIGLPGQIGTTGPKGDMGSPGAPGLTGPPGKPGPPGKFLGVEEGSADFQCPTNCPP
GPKGPQGLQGVKGHKGRAGVLGDPGSIGKVGVKGEVGISGEQGIPGPPGPQGLRGYPGMV
GPKGETGPPGYKGILGTIGIPGRPGEEGPQGPPGEPGDKGDMGGRGIRGPQGVVGKKGEN
GLPGIDGKDGTPGIPGIKGATGQNGRPGAPGLQGDAGLPGMPGAKGEIGIKGETGTRGLT
GMQGPPGPQGEPGPPGEAGMEGVPGSKGDRGERGPVGPPGIVGLPGSKGERGPMGVPGAQ
GLTGTKGDKGFQGKVGSKGDVGDPGVEGLAGEKGEKGQSGEPGPKGQQGVTGDQGNNGPT
GDPGKPGDQGPAGLPGSRGLHGERGVPGMPGIQGPPGRDAIDQHIIDVVLKMLQEKLAAV
AVSSKRAVLGGAGVMGPPGPPGPPGTPGSQGPHGLPGGRGIPGIIGGPGQIGNTGLKGKR
GAKGERGDPGRPHPGQPGPPGLPGPPGLDGVARDGRPGERGPQGAAGEPGRPGKAGPLGL
PGFCEAAACLAASAYTSPRLQEAGTVKGPST
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggatagattcttcatcatcttcagaagcctggtcctgttgcaggtgctctgcttggcc
ttatcacaagtgaccggtccacccggaccgcagggcccccttggtccccctggccccgct
ggaactcccggtgccgacggcattgatggtgaaaaaggccctcctggacctcctggacca
gcaggtcaaaagggagagtcaggtgagcctggtcctgatggatctccaggggaggatggc
attgatggtttgattggggctaagggtgagaggggccctcgtggtaatcctggaccaaag
ggtcagccagggcctggtggaccaccaggacgacctggacctggactgcctggacttcct
ggagcagcaggccccattgggcttcctggacaaattgggactactgggccaaagggtgac
atgggaagtcctggagctccaggattaaccggacctccaggaaagccaggtccaccagga
aagtttttgggtgtagaggaaggcagtgctgacttccagtgtccaaccaactgtccacct
gggccgaaaggtcctcagggcctacagggagtgaagggacataaaggtcgcgctggggta
ttgggagatccaggaagcatcggaaaagtgggtgtaaagggtgaagtgggcatctccggt
gaacaaggaataccaggccctccaggtccacagggtctgagagggtatccaggaatggtg
gggcccaaaggcgagacgggaccacctggttataaaggaattttaggaacaatcggcatc
cctggacgccctggtgaagaaggaccccaaggaccacctggagagcctggtgacaagggc
gacatgggagggcgtggaatacgaggacctcagggagtggtcggaaagaagggagagaac
ggtcttccaggaattgatggaaaagatggtactcctggcatcccaggaataaagggagct
acaggacaaaatggaagacctggagctcctggtcttcagggagacgctggtttgcctggt
atgcctggagccaagggtgaaattggaattaagggtgagacaggaacccgaggcttgacg
ggaatgcaaggtcctccaggacctcaaggagagcctggtcctccaggtgaagctggcatg
gagggagtcccaggttcaaagggtgacaggggcgaaagaggaccagttgggcctcctggt
attgttggtttgcctggcagtaaaggagagaggggacccatgggcgtcccaggtgctcag
ggtctaactggaactaagggtgacaagggattccaaggcaaagtgggatcaaagggagac
gttggtgatcctggtgtagagggattggctggggagaaaggagagaagggacaatctggg
gagcccggacctaagggacagcaaggtgtgaccggtgatcaagggaacaacggccctacc
ggagatcccggtaaaccaggagaccagggtcctgcaggcttacctggttcacgtggcctg
catggagaaagaggagttccagggatgccaggaatacaaggaccacctggtcgtgatgct
atagatcaacacatcattgacgttgtcctgaagatgcttcaagagaagttagcagcggta
gcggtgagctctaagagagccgtgctgggtggagcaggtgtgatgggccctccaggtcct
ccaggaccacctggaactccaggatctcagggtcctcatggactgccaggcggccgtggc
attcctggcataatcgggggcccaggccagataggaaacactggtcttaaagggaagagg
ggtgcaaagggagagagaggagatcctggacgaccacatcctggccaaccgggaccacct
ggactgccaggtcctccaggtcttgacggtgtggctcgtgacggtaggccaggcgagcga
ggacctcagggtgcagcgggtgagccaggccgtcctggaaaggctggtcctctcggtctt
cctggattttgtgaagcagctgcatgtttggcagcctctgcctacacttctcccagatta
caagaggcaggaacagtaaagggcccatccacttaa

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