Sinocyclocheilus anshuiensis: 107677608
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Entry
107677608 CDS
T04917
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPB subunit-like
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03022
Basal transcription factors
sanh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107677608
09124 Replication and repair
03420 Nucleotide excision repair
107677608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sanh03021
]
107677608
03400 DNA repair and recombination proteins [BR:
sanh03400
]
107677608
Enzymes [BR:
sanh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107677608
Transcription machinery [BR:
sanh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107677608
DNA repair and recombination proteins [BR:
sanh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107677608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
107677608
NCBI-ProteinID:
XP_016328049
UniProt:
A0A671K8M8
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MGKKDKSVRDKKSKKRYYDEEEDDEEVMGSESQEAVPAAAGKQVDESSTKLDEYGAKDYR
LQMLLKNDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAISEPVCRPTHVHEYKLTAYS
LYAAVSVGLQTSDIIEYLQKLSKTSVPDGIVQFIKLCTVSYGKVKLVLKHNRYFVESAFP
DVIQRLLQDTVIRDCRLRSAEGEETELITETISSKSAISKSQQDNGGPSTSQPADGQCTG
NQVPEDIFSYYEQMDKEEEEEEETQTVSFEIRQEMIEELQKRCIQLEYPLLAEYDFRNDT
VNPDINMDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRC
LVLGNSSVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSW
EAERVMEWMKSQEWGLIILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLN
FLIGPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYHEYVAIKTKKRILLYTMNPNKF
RACQFLIRFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPK
INTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAYFYS
LVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEALMFSSREEQQQLLHKVLAASD
LDAEEEVVMGDVGGKPQFSRRMGTMSSMSGADDTVYMEYQTSRSGKSLAGKNVHPLFKRF
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaagataagagtgttcgagataaaaagtccaagaaacgttattatgatgag
gaagaggatgatgaagaggtgatgggcagtgagtctcaggaggctgttccagcagctgct
gggaagcaggtggatgaatccagcactaaactggatgagtatggagccaaagactacaga
ctacagatgcttctcaagaatgaccacacttcccggcccctatgggtggctcctgatggt
cacatcttcctagaggctttctctcccgtgtataaatacgctcaggacttcctggtggcc
atatcagagccggtgtgcagacctacccatgtgcacgagtacaagctgacggcttattct
ctatacgccgctgtgagtgtcggcctgcagacctctgacatcatagagtacctgcagaaa
ctcagcaagacctctgtgccagacggcatagtgcagtttataaagttgtgcacagtgagc
tacggtaaagtcaaactggtcctgaaacacaacaggtactttgtggagagtgcgttccct
gatgtcattcagaggctcttacaggacacagtgattcgggactgtcgtcttcggtctgct
gagggtgaggagactgagctcatcactgagaccatctctagcaaatctgcaatctcaaag
tctcagcaggacaatggtggtccatccacctcccagcctgcagacgggcagtgcacagga
aatcaggtgccagaggacatcttcagttactacgagcagatggacaaagaggaggaggag
gaggaagagacacaaacagtgtcttttgagatccgtcaggaaatgatagaggagcttcag
aaacgttgcattcagttagaatatcctctcttggctgaatatgatttccgtaacgacacg
gtaaacccagacatcaacatggacctgaagcccactgctgtgctgagaccatatcaggaa
aagagtctaaggaagatgtttgggaacggcagagctcgatctggagtcatcgtcctgcct
tgtggtgctggaaagtcactggtgggcgtcactgctgcctgcacagtgcgtaagcgctgt
ctggtgttgggaaactcctctgtgtcagtggaacagtggaaggctcagtttaagatgtgg
tccaccatcgatgactcccagatctgccgtttcacttcagatgcaaaagacaaacccatc
ggctgctcggtggccattagtacttattctatgctgggccacaccaccaaacgctcatgg
gaggctgagagggtcatggagtggatgaaaagtcaggagtgggggctcattatactagat
gaggtgcacacaatcccagcaaagatgttccgtcgtgttctgacaatagtccaggctcac
tgtaaactgggtctcactgccacactagtaagagaggatgacaagattgtggatctgaac
ttcctgattgggccgaagctctatgaggcgaactggatggaactacagaacagtggttac
attgctaaagtccagtgtgctgaggtatggtgtcccatgtctcctgagttttatcatgaa
tatgtggccataaagacaaagaagagaattctgctctacaccatgaatcccaacaagttc
cgtgcatgtcagttcctgatccgcttccatgagcggagaaacgacaagatcatcgtcttt
gccgacaacgtcttcgctctgaaagaatatgccatccgcctgaacaaaccgtatatttat
ggacccacatctcaaggagaacgtatgcagatccttcagaactttaaacacaatcccaaa
atcaataccatcttcatctccaaggttggagatacttcatttgacctgccagaggcaaac
gtgctaatccagatctcgtctcacggcggttctcgccgtcaggaagctcagagactgggc
agagtgctgcgagccaagaaaggtatggttgcggaagaatacaatgcttacttttactcg
ctcgtctctcaggacacacaggaaatggcttactccaccaagagacagcgcttcctagtg
gaccagggatacagtttcaaggtgatcacaaaattggctgggatggaggaggaagccttg
atgttttcctctcgtgaggaacagcagcagctcttgcacaaagttctggcagcatcagat
cttgacgcagaagaggaagtggtgatgggagacgtgggagggaagccacagttttctcgc
cgtatgggaactatgagctccatgtctggtgcagacgataccgtctacatggaataccag
acgtcccgcagtggcaagtctttagctggcaagaatgtccatcctctgtttaaacgcttc
cgcaagtga
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integrated database retrieval system
