Streptomyces antimycoticus: QR300_29650
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Entry
QR300_29650 CDS
T09335
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sant
Streptomyces antimycoticus
Pathway
sant00040
Pentose and glucuronate interconversions
sant01100
Metabolic pathways
sant02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sant00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
QR300_29650
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QR300_29650
Enzymes [BR:
sant01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
QR300_29650
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
WJD99818
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Position
6880712..6881845
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AA seq
377 aa
AA seq
DB search
MRSTHDHGTTHDFGDVTGATGVTSALSTPVTARNRRRLTAVTAGVAAALALGGLSTVSAH
DADSADSARSESPHTTAAAGSATAAHPTAETTPIGFGAGTTGGGNATATTVTSLDAFKAA
VTGDKAKVVKVSGLFSLTGQVDIGSNTTVLGVGSGSGFTGGGLRLKEATNVIVRNLNLSK
PRKPSDAITVQKSTKVWIDHNTLSADRDHDKDYYDGLLDISHGSDNITVSWNRFADHFKG
SLVGHSDNNASEDTGHLRVTYHHNWFANVYSRIPSLRFGTGHFYDNYVQGAETGVHSRMG
ARTLVENNVFRDTEVAVTTSRNSDIDGYAVLRGNDLGGAATEVSQTGGFTTPPYAYTAEP
ASSVVASVTAQAGAGKL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgacgcacgaccacggcaccacgcacgacttcggtgatgtcaccggcgccacc
ggtgtcaccagcgccttgagcactcccgtcaccgcccgcaaccgacgtcggctgacggcg
gtcaccgcgggcgtcgccgcggcgctcgccctcggtggcctctccacggtctccgcccat
gacgcggactcggccgactccgcacgctccgagagcccacacaccaccgccgccgcaggc
tccgccaccgccgcccaccccaccgccgagaccacccccatcggcttcggcgccggcacc
acgggcgggggaaacgccaccgccaccaccgtgacctccctggacgccttcaaggccgcc
gtcaccggcgacaaggccaaggtggtcaaggtctccgggctgttctccctcaccggccag
gtggacatcggctccaataccaccgtgctgggcgtgggttcgggctccggcttcaccggc
ggtggactgcggctgaaggaggcgaccaacgtcatcgtccgcaacctcaacctcagcaag
ccccggaagccgtccgacgccatcaccgtgcagaagtccacgaaggtgtggatcgaccac
aacaccctctcggccgaccgcgaccacgacaaggactactacgacggtctgctggacatc
agccacggctccgacaacatcaccgtctcctggaacaggttcgccgaccacttcaagggc
agcctggtcggccacagcgacaacaacgcgagcgaggacaccggccacctcagggtgacg
taccaccacaactggttcgcgaacgtctactcccgcatccccagcctgcgcttcggcacc
ggccacttctacgacaactacgtccagggcgcggaaaccggtgtgcactcccggatgggc
gcgcggacgctggtggagaacaacgtcttccgcgacaccgaagtggccgtgaccaccagc
cggaacagcgacatcgacggctatgcggtgctgcgcggcaacgacctgggcggggcggcc
acggaggtgtcccagaccggcggcttcaccaccccgccgtacgcgtacaccgcggaaccg
gcgtcctccgtcgtggcgagcgtcaccgcccaggcgggcgcgggcaagctctga
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