Spiroplasma apis: SAPIS_v1c08450
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Entry
SAPIS_v1c08450 CDS
T02945
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sapi
Spiroplasma apis
Pathway
sapi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sapi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAPIS_v1c08450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapi03019
]
SAPIS_v1c08450
Messenger RNA biogenesis [BR:
sapi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAPIS_v1c08450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
DUF4453
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AHB36690
UniProt:
V5RLH8
LinkDB
All DBs
Position
1005271..1007058
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AA seq
595 aa
AA seq
DB search
MEQKEKITSSIVADLEKKIEVKKLADNKTPNKKKMEHAPFPTKVFALGGLEEVGKNTYCI
EYDDEIIMLDAGVKFPDATQLGVSAVIPDYSYLVENNTKVKALFITHGHEDHIGGIPHLL
QQVDIPVIYAPELAAALIRDRIREHKLQNKTVVREYVENDVYSTKNFVIQFAAVNHSIPD
AFGIHVTTPNGAIFSTGDYKFDWTPLGHSANIQRMANWGNEGIELLMSDSTNAEVEGYTL
GERKVIQNIDAHFLKAKGRIIIASFASNVHRIQHIIELANKYGRRILVIGRSLERIIKII
RQMGHLNINDKMFIKANDIDNFPKNQIMILCTGSQGEPMAALSRIARLEHQTIKLIPGDT
VIMSSSPIPGNRADVENIVNKLTKIGAIVIENTGEQKIHTSGHASQEEQKLLFTLLKPRC
FMPMHGEFRMLKTHGETATKVNVKPHNVFVVANGDQILLHNGTAELGKRIPADAIFIDGK
DMTGKASNVIRERNILSRDGLMAVIISIDSQANRLSAPPRIVSRGSFYVRESGNVIAESI
NIVTQAVQNVLSSSKPTFGAIKKVIKESLSPFIFRYKRRNPLIIPVILNKKIEVK
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaaagaaaagataacatctagcatcgtagcggatctagaaaaaaaaatagaa
gtaaaaaaactagcagataataaaacacctaataagaaaaaaatggaacatgcaccgttt
ccgactaaggtattcgctttaggggggctggaagaagttggtaaaaacacttattgtata
gagtatgatgatgaaattataatgttggatgcaggggttaaatttcctgatgcaacgcaa
cttggtgtaagtgcggttattcctgattatagctatttagtggaaaataatacaaaagta
aaagcattatttatcacgcacgggcatgaagaccacattggtggaattccacatttacta
caacaagttgatatacctgttatatatgcaccagaattagctgctgctttaatcagagat
agaatcagagaacataaattacaaaataaaactgttgttagagagtatgttgaaaatgat
gtgtactcgactaaaaattttgtaattcagtttgcagcagtcaaccactcaattcccgat
gcattcggaatacacgttacaacaccaaatggagcaattttctcaactggtgattataag
tttgactgaacacctttaggtcattctgccaatatacaaagaatggctaattgaggtaat
gaaggaatagaattgctgatgtcagactcaacaaacgctgaagttgagggttacactttg
ggtgagagaaaagtaattcaaaacatagatgcccatttcttaaaagctaaaggaagaata
ataatcgcttcatttgcttctaatgtacaccgtattcaacatattatagaattagcaaat
aaatatgggagaagaatattagttattggacgtagtttagaaagaataatcaaaattata
cgacaaatgggtcacttaaatataaacgataagatgttcataaaagcaaatgatattgac
aattttccaaaaaatcaaattatgattctttgtaccggaagccaaggtgaaccaatggct
gccctatctagaatagcacgtcttgaacaccaaacaataaaattgataccgggtgataca
gtaattatgtcttcgtcaccaataccaggaaatagagcggacgttgaaaatattgttaat
aaattaacaaaaataggagcaatagttattgagaatactggtgaacaaaaaatacataca
tcaggtcatgccagtcaagaagaacaaaaattactattcacattgttgaaaccaagatgt
tttatgccaatgcatggtgagtttagaatgcttaaaacacacggagaaacagctacaaaa
gtaaatgtcaaaccacataatgtgtttgttgttgcaaacggggatcaaattttattacat
aatgggactgcagaattaggcaaaagaatacctgcagatgcaatatttattgatggaaaa
gatatgacaggaaaagcaagtaatgttattagagaaagaaatatcctaagtcgtgacgga
cttatggcagttataatatctattgactcacaagcaaatagattatctgcaccaccaaga
attgtctctagaggaagtttctatgttagagaaagtggaaatgttattgctgaatcaata
aatatcgttacacaagctgttcaaaacgttttaagttcatcaaaaccaacttttggagct
attaaaaaagttatcaaagaatcattatcaccattcattttcagatataagagaagaaat
cctttaattataccggtgattttaaataagaagatagaggttaaataa
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