Scedosporium apiospermum: SAPIO_CDS10868
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Entry
SAPIO_CDS10868 CDS
T06367
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAPIO_CDS10868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapo03019
]
SAPIO_CDS10868
Messenger RNA biogenesis [BR:
sapo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SAPIO_CDS10868
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SAPIO_CDS10868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
27720107
NCBI-ProteinID:
XP_016638624
UniProt:
A0A084FUR3
LinkDB
All DBs
Position
Unknown
AA seq
2194 aa
AA seq
DB search
MVPPPRTGSFSPNPVQTHQSGPGHPPHASQSAILSAAASPSTSSPTGSSSLTKIAITQVS
LLLSTIKDESDPKYGAQVTQLRKLIDDHGMEVYSRFLTRLVAGNASQIFPGLNRQVTNQG
NHQVLVGEVRKISHDPDQASKIAESIESGTEDIFRDFDLSTFMEHFKLDALEKTLLASAF
KLGSRPDLKTKADAILSTNFPTFTYILSRPDLPEHSDLSPAFVAKIVDRFVQYPPPNFLS
SAKSELTSKVKARYFHQDQPPPSEVLAALDLIRLLADGPSNALVHYIQRTGSDFTRDEET
CVGFLQNRPANVQLSEEQVSAGLMYTVISQTPKFKPSVLTAALRRVLPSSFRWFRVVSGF
DKDSARISPEQFLSLYKALLPLAQDEATQFDIQTLWGGNWENAEAQLSFVCAFASLTPDQ
LDASTIPGLVPTISLDSYADSSASVKERVSIAVKHPLVSVAALSAVFHVALHSVQASQSI
EAKRLFQDVVVPNLDIFVVSAFGVPKPWPGMAVDTLNSLFENFLYKRSPEYEFVLESLWK
RDKDWVTQRLVDTHAAKPTDLPLIFEHAVRHGWLEVLSSLPNGFGLDLASFAHAEGCLDF
TDWARRNADHSAEMAPCLMQFLMIKATLESQFQRPETLPAIKTTTTLQVRTVSALLQILE
DFMPRSPVQELIIVQRQCITAYPRLINYGEGYDDVIDANGKDGNSLPPAANIKMEEHYKK
MYGNEIEVRDIVEVLDRYKHSRDPLEQDIFACMIHGLFDEYTHYIGYPLEALATTAVLFG
GIISHKLISDLPLKVGLGMILESVRDHMPDEAMYKFGLQALIQLLPRFHEWPGFCKQLLL
IPALQGTDAWLRAEEVIREQDDISRTRSGQGGGGGGGVHLAGYSDEVMANGLPKDGLGSE
QQAPPFTAISVDPPPTDVEFEEPSGDDQGKIQFVLNNITETTLQSMCNELRELLERRHQQ
WFASHLVEERAKMQPNYHRVYVELVNLLEDRALWAEVLRETYSSVSRMLNAESTMQNSTE
RTHLKNLGGWLGLLTLARNKPIKHRNIAFKKLLLEAHDTKRLVVVIPFVCKVLIQGSLST
VFRPPNPWLMDIIHLLIELYHHAELKLNLKFEIEVLCKGLNLDHKSIEPSGEILNRAILE
ESAEAAAQETLDAFDGLTLNGITPAVAGGLGSQAITPVIPDIGPMINIPPTNEMVVNATR
LHEIVRTALSRALAEIIQPVVDRSVTIAAISTQQMIHKDFAIEPDENRVRACAINMVKAT
AGSLALVTSKEPLRANFTNYMRNLSNDLPQGLPEGTIMMCVNLNLELGCSIIEKQAEERA
VPEIEEIIQDELESRRRHRAQKPMEPYAGPSLNRWASALPAPYRLVEGMSGLTPEQMAIY
EDFARHPRSSTASAPTHTPSAADAATRSLANEVLQDQFGGLPGIPAPSETPSVQQHMAAH
VQPYAAVQAASATNGRPPATPVDLSLMAGRFLKLLLELQRVATEAREKHFHSLPRPHPVL
DLVDALVQIIIKTSQGSEEMAMYAAEQISQLLFSHIEDSLTLESLAHVLETLRKISGPAV
SSRIRILFRQQPGHFFLHLPLLNALSGTDLMDWKNIDTAMSKALQQRKEGSLEFLETLLD
LALLNDRPLALHADFVRTLEAAWPWVLEDSNSPVGQHVKAKLVGGGLARPPAPLNAESPL
AQRQDQMEYVFEEWIHLCNNANATEKSMMVFLQQIQAKNIIGDRDDFFLFIRLAIDVSID
RFEQLIHTGGVSEAFVPIDSLARLLGVFVRAHPGVTAASNENRPAYLESILALVTLVLHH
HHMKRGEHFNQRAFFRLLSMILHEIDSLVDHVPAPERLEMVIKFAVALRDLGPRFVPGFT
YGWMSLIQHRIFLPAILGTESQAGWTPLTLLICDMLDYLGDQLKVPELSTSSKEVYRSVL
KFLVVLQHDYADYVSANYNQLCWAIPTHCAQLFATVLATTPPALQKIPEPPQQGLKAAGP
DELADTPAIGREVVEILQQRGVLDVLTQALQDGPSEGVLAHIIHSIGRSSGKVATSFGFV
TVSVDLPALEAIPTYIAGFAVDRAKQKGGPVYVPGSSDTTILTLLVRELNPEGRYYLISS
MVNQLRFPNAHTHYFGQLLLDIFGHDLTDAEEDEVRQQITRILLERLVGFWPQPWGLMVT
VVELLKNEKYMFFEQPFIKSAPEVADRFMAVLRQ
NT seq
6585 nt
NT seq
+upstream
nt +downstream
nt
atggtcccaccacccaggacgggatccttctcgccgaatcctgtgcagacacaccagtcc
ggacctggtcaccctccacacgcatcccaatcggccatcctcagtgctgctgcgagcccg
agcacaagcagccctacggggagcagctccctgaccaagattgcgatcacccaagtctcc
ttgttactcagcactatcaaggacgagagtgatccaaaatacggcgcccaggtcacacaa
ttgagaaaacttatcgatgaccacggcatggaagtttattctcgattccttacaaggctc
gtggccggaaatgcttcccagatattccctggccttaatcggcaggtaacgaatcagggc
aaccatcaggttttggtcggcgaagtgcgcaagatcagccatgatccggaccaagctagc
aagattgccgagtccatcgagtccggcaccgaggatatctttcgggacttcgatctctcc
acctttatggagcactttaagcttgatgctctcgagaagacgcttctggcttcggctttc
aagctcgggtcgcgtcctgatttgaagactaaagcggacgcgattctctccaccaatttc
ccgaccttcacctatatcctctcgcgacccgatctgcctgaacattccgatctcagtcct
gctttcgtggccaaaatcgttgaccgattcgtccaatatcccccgcctaatttcttgtcg
tctgcaaagtctgagctcacctccaaggtgaaggcgcgatacttccatcaggaccagcca
ccaccatctgaagtgttggctgccttggaccttattcggctcctcgcagatggaccttcg
aatgcccttgtacattatattcaacgcaccggttccgatttcaccagagacgaagagact
tgtgttggcttcctccaaaatcgcccggcgaatgtccaattaagcgaggagcaggtttcg
gcaggtctcatgtacaccgtgatcagtcagacccccaaattcaagccatccgtcttgacc
gccgctcttcgccgagtgcttccctcaagctttagatggttcagggttgtttcgggcttc
gacaaggattcggcgcgaatctctccggagcagttcctgtcactgtacaaggccctcctt
ccccttgcccaggatgaagccacgcaattcgatatccagactctctggggcggtaactgg
gaaaatgccgaggctcaactgtcgttcgtctgcgccttcgcctctctgaccccagaccag
ttggatgccagcactatacccggtctcgttcctaccatttctctcgactcatacgcagac
tcctccgcctccgtcaaagagcgagtatcaattgccgtgaaacacccgctggtttctgtt
gccgccctctcagcagtcttccacgtcgcgttgcattccgttcaggcatcgcaaagcatc
gaggccaagcggcttttccaggatgtcgtggttcctaaccttgacatctttgttgtttcg
gcatttggtgttcctaaaccctggcccggcatggcggtcgatactcttaattcgcttttc
gagaatttcctatacaagcgatcgcccgagtacgaatttgtcctcgagagtctctggaag
cgggataaggattgggtcacgcagaggctagttgacactcatgccgctaaaccgacagat
cttcccctcattttcgaacacgcagtgcgccacggttggctggaagtcctttcctctctc
cccaatggattcggtctggaccttgcttccttcgcgcatgccgagggctgccttgacttc
acggactgggctcgtcgcaatgctgatcacagtgccgagatggctccttgtctgatgcag
ttcctgatgattaaagcgactcttgagagccagtttcagcgaccagagaccctcccagcg
atcaaaaccaccacaactcttcaagtgcgaacggtttcagcgcttctacagatccttgag
gacttcatgccaaggtcgccagtgcaggagttgattatcgtccaacgacaatgcattacg
gcatacccacgcctaatcaactacggtgaggggtatgacgacgtcattgatgccaacggc
aaggacggaaattccctccctccggcagccaatatcaaaatggaggagcattataagaag
atgtatgggaacgaaattgaagtccgtgatattgtggaggttctcgatcgctacaagcac
tctagggatcccctcgagcaggacatcttcgcctgcatgattcatggcctcttcgacgaa
tacacccattacatcggatatcctctagaggcgctggcgacaacggcagtgctctttggt
ggaattatctcccacaagctgatctcagacctaccgttgaaagttggcctgggtatgatt
ctggaatcggttagagaccatatgccagacgaagccatgtataaattcggtcttcaagcg
ctcattcaacttcttccacgtttccacgaatggcctggcttctgcaagcagctccttctg
atcccggcgctccagggcacggacgcttggctgcgggcggaagaagtgattcgagaacag
gacgatatatccagaacccgcagtggacaaggtggcggcggaggtggcggcgtccatctt
gcaggctactctgacgaggtgatggccaacggtctgcccaaggatggccttggttctgaa
cagcaagccccaccattcactgctatctcagtagacccgcctccaaccgacgttgagttc
gaggaacctagtggcgacgaccagggcaaaattcaatttgttctcaacaacatcaccgag
acaacgttgcagtcgatgtgcaatgagctgcgtgaacttctcgagcgtcgccatcagcaa
tggtttgccagccatcttgttgaggagcgcgccaagatgcaacctaattaccaccgagtc
tatgtcgaacttgtcaatctcctcgaagacagggcgctctgggcagaggtcttgcgcgaa
acgtatagcagcgtctcacgcatgctgaatgctgagagcaccatgcagaactcgactgag
agaacgcatctgaagaacctcggtggatggctgggtctccttactcttgcaaggaacaag
cccatcaagcatcgcaacattgcgttcaagaaactcttgctggaagcccacgatactaag
agactcgttgtggtcattcctttcgtctgcaaggttcttattcaaggatcactttccact
gtcttccgacccccgaacccgtggcttatggacatcatccatctcctcatcgaactttat
caccacgccgagctcaagcttaatctgaagtttgagatcgaagtactttgcaaaggcttg
aaccttgaccataagagtatcgaaccatctggcgagatcctcaaccgggcgattttggaa
gaaagcgccgaggcggctgcgcaagagactcttgatgcgtttgatggactgactctgaac
gggattaccccggccgtcgctggtggacttggctcgcaggctattacgccagtgattccc
gatatcggcccaatgatcaatattccacccaccaacgagatggtcgtcaatgcgacaagg
ctgcacgagattgtccgtactgccctttctcgtgcgcttgccgaaatcatccagcccgtg
gtcgacaggtcggttaccattgcggccatttcaacccagcagatgatccacaaggatttc
gctatcgagccggacgagaatcgcgtgcgcgcctgcgctattaacatggttaaggctacc
gcgggaagtcttgccctggttacatccaaggagcccctgcgggctaacttcacaaactat
atgaggaacctgtctaacgacctgccgcaaggtctccctgagggcaccattatgatgtgt
gtcaatctgaaccttgagcttgggtgcagcattatcgagaaacaggctgaggaaagggct
gttcctgagattgaggagataatccaggacgagctggaaagccggcgccgacatcgtgcc
cagaagcccatggagccgtacgctggtccatctctcaaccgctgggcgtcagcactcccc
gccccctataggttggtggagggcatgtccggtctaactccggagcagatggcgatctac
gaggacttcgcccgacacccgcgcagcagcaccgccagcgctccaacccacaccccgtcc
gcggctgatgcggccacgcggtctcttgccaacgaggtcctgcaggatcagttcggcggc
cttcccggtatcccggccccatccgagaccccatcagtccagcagcacatggctgctcac
gtgcaaccgtacgcggctgttcaggccgccagtgcaactaacggccgacctcccgctact
ccagtggacttatctcttatggcgggacgcttcctcaagctgttgctagagctccagcgc
gttgccaccgaagccagggaaaagcatttccacagcctacccaggccgcatcctgtccta
gatctcgtcgatgccctcgtgcagatcatcatcaagacttcgcaaggctcggaggagatg
gccatgtatgcagctgagcaaattagccagctgctattcagtcacattgaggacagcctg
accctagagagcctggcacatgttctggagacattgaggaaaatttccggacccgcggtc
agcagccgtatccggatcctcttccgtcaacagcctggccacttcttccttcatctgcct
ttgctaaatgcattgtcaggaaccgatctcatggattggaagaatatcgataccgcaatg
tcgaaggcgctccagcagagaaaggaaggctcgcttgagttccttgagacgctcctggac
cttgcgcttctcaacgatcgacccctcgccctgcatgccgactttgtcaggaccttggaa
gctgcgtggccctgggtgctcgaggatagcaattctcctgttggccagcacgtcaaggcc
aagctcgtcggcggaggcctggcacgaccgcctgcgccgcttaacgcagaaagccccttg
gcccagcgtcaagaccagatggaatacgtgtttgaggagtggatccatctctgcaacaat
gcgaacgcaaccgagaagtcgatgatggtcttcctccagcagatccaagccaaaaacatc
atcggggatcgagacgacttcttcctctttatcaggttagcgattgatgtttcgatcgat
aggttcgagcagcttatccacacgggtggtgtttccgaagccttcgtgcccattgactct
ctggcacgacttctcggtgtctttgtgcgagcccatcccggcgttacagcagcatcgaat
gagaaccgacccgcgtacttggaatcgatccttgctctcgtcactcttgtgctgcatcat
caccacatgaagcggggtgagcatttcaaccagcgcgcctttttccgcctcttgtccatg
atccttcacgagattgatagcctcgtcgaccatgtgccagcccccgagcgactggagatg
gtgatcaaatttgccgtggcgctcagagatttgggaccccgattcgtgcctggtttcacg
tacgggtggatgtcgttgatccagcaccgcatcttcctaccggccatcctcggaacggag
agccaagctggctggacgcctctgactctactgatctgcgacatgctcgattaccttggt
gaccagctcaaggtacccgagctgtcgacgtcatccaaggaggtgtacaggtcagtcctc
aagttcctggttgtgttgcagcatgactacgcggattacgtctcggccaactacaaccag
ctttgctgggccatccccacgcattgcgcccaactcttcgcgacggttctagcaacgaca
ccgcccgccctgcaaaagatcccggaacctccgcagcaaggcctcaaggcagctggacct
gacgagctcgcggataccccggctatcggtcgagaagtagttgagatcctccaacagcgc
ggagtgttggacgtgctcacccaggcgcttcaggacggcccatcggagggcgtgcttgcg
catatcattcactcgatcgggcgcagttccggcaaggtggcaacgagcttcgggttcgtg
accgtctctgttgatctgcccgccctcgaggccattcccacgtacattgcaggcttcgcc
gtggatcgagctaagcagaagggcggaccggtctacgtgcccggatcgtcggacacaaca
atccttactcttctcgtgcgcgagctgaaccccgagggccgctactaccttatttcctcc
atggtcaaccagttgcggttccccaacgcacacacgcactactttggccagctcctcctc
gacattttcggacacgacctcacggatgcagaggaggacgaggttcgacagcagattact
cgaatcctcctggagcggctggtgggtttctggcctcagccttggggactgatggttacg
gtagtggagcttctcaagaacgagaagtacatgttctttgagcaaccttttatcaagtcg
gcgcccgaggtggccgatcgattcatggctgtgttgagacagtaa
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integrated database retrieval system
