Sorex araneus (European shrew): 101539369
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Entry
101539369 CDS
T07854
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101539369 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sara03000
]
101539369 (PHF1)
03036 Chromosome and associated proteins [BR:
sara03036
]
101539369 (PHF1)
Transcription factors [BR:
sara03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
101539369 (PHF1)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
101539369 (PHF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
Prok-RING_1
Chromo
PHD_ash2p_like
C1_1
DUF4537
PHD_2
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
101539369
NCBI-ProteinID:
XP_004617719
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MAQPPRLSRSGAPSLWDPASPAPTPGARPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVGPGNRLVSCDKCRHAYHQDCHV
PRAPGPGEGEGTAWVCRQCVFAIATKRGGALKKGPYARAMLSMKLSLPYGLKGLDWDAGH
LSNRQQSYCYCGGPGEWNLKMLQCQSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
RSSKLLTALNSHKDRFISGREIKKRKCLFGLHARTPPPVEPPPGDGAPTSFPSGQGPGGG
VSRPLGKRRRPEPEPLRRKQKGKTEEQEPPSAEPQEQRERARLQRALQASVSPPSPSPNQ
SYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDGEPPDRSPLELHIGFPTDV
PKSAPPHSMTASSSSAPASSPSLPRRSAPPSPLCRGLSAGAAGGVRGGVGYLSRGDPVRV
LARRVRPDGSVQYLVEWGGGGIF
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcccccccggctgagccgctctggtgccccctcactctgggacccggcttcc
cctgcacccacgccaggcgccagacctcggctttgggagggtcaggatgtgctggcccgc
tggacagatgggctgctgtatttgggaaccatcaagaaggtggacagtgcccgggaggtg
tgtctggtccagtttgaggatgactcccagtttctggttctctggaaggacattagccct
gctgccctgcctggggaggaactcctctgttgcgtctgccgctccgagactgtgggcccc
gggaaccggctggtcagctgtgacaagtgtcgccatgcttatcaccaggactgccacgtg
ccaagggccccgggccctggagagggagaaggcacggcttgggtctgccgccagtgcgtc
tttgccatcgccaccaagagggggggtgcgctgaagaagggcccctatgcccgggccatg
ctgagcatgaagctgtctctgccgtacggactgaaggggctcgactgggacgcaggacat
ctgagcaaccggcagcagagctactgctactgcggtggccctggggagtggaacttgaag
atgctgcagtgccagagctgcctgcagtggttccatgaggcctgcacccaatgtctgagc
aaacccctgctctatggggacaggttctatgagtttgaatgctgcgtgtgtcggggcggc
ccggagaaggtcaggaggctgcagcttcgctgggtggacgtggcccatctcgtcctctac
cacctcagtgtttgctgtaagaaaaaatactttgattttgaccgagagatcctcccgttc
acctccgagaattgggacagcctgctccttggggagctctcagacacccccaagggagaa
cgttcttcgaagctcctcaccgcgctcaacagccacaaagaccgcttcatttcagggagg
gagattaagaagaggaaatgcctgtttggtctccacgccaggaccccgccccccgtggag
cctcctccaggagatggagcccccaccagcttcccttcagggcagggccctgggggaggg
gtctcacgtcccctggggaagcgtcggaggccagagccagagcccctgaggaggaaacag
aaggggaaaacagaggagcaggagccgccgtcagcagagccccaggagcagagggagcgg
gctcggctgcagagggcactgcaggcctcggtgtcgccgccgtcccccagccctaaccag
agctaccagggcagcagcggctacaacttccggcccacagatgcccgctgcctgcccagc
agtcccatccggatgttcgcttctttccacccctctgccagcaccgcagggacctctggg
gatggggaacccccagacaggtcacccctggaacttcacattggtttccccacagatgtc
cccaagagtgccccccctcactcgatgactgcctcatcttcctcagccccggcctcctcc
cccagtcttccccgacgctcggcacctccttcccccctgtgccgcggtctgtctgctggg
gctgcgggaggagtccgaggtggggttggctacctgtcccgcggggaccctgtccgcgtc
ctggctcggagagtgcggcccgatggctctgtgcagtacctggttgagtggggaggtggg
ggcatcttctga
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