KEGG   Sorex araneus (European shrew): 101540432
Entry
101540432         CDS       T07854                                 
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
sara  Sorex araneus (European shrew)
Pathway
sara03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sara00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101540432 (PRPF38B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sara03041]
    101540432 (PRPF38B)
Spliceosome [BR:sara03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    101540432 (PRPF38B)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    101540432 (PRPF38B)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 101540432
NCBI-ProteinID: XP_004620098
LinkDB
Position
Unknown
AA seq 549 aa
MANNSPALTGNSQPQHQAAAAATQQQQQQQQQQCGGGVPKPAVSGKQGNVLPLWGNEKTM
NLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGV
RGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWD
WFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTR
PRKIKKDGKEGTEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELE
REKERQRLEREAKEREKERRRSRSIDRGLDRRRSRSRERHRSRSRSRDRKGDRRDRDRER
EKENERGRRRDRDYDKERGNDRERERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDEK
KDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQ
GRTDSVEKSRKREHSPSKEKSRKRSKSKDRTHKRDHSDSKDQSDKHDRRRSQSIEPESQE
KHKNKDETV
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggcggcg
gccgcgacgcagcagcagcagcaacagcagcagcagcagtgcggcggcggcgtccccaag
ccggcggtgtcgggcaagcagggcaacgtgctgccgctgtggggcaacgagaagaccatg
aacctcaaccccatgatcctgaccaacatcctgtcgtcgccttacttcaaagtgcagctc
tacgagctcaagacctaccacgaggtggtggacgagatctacttcaaggtcactcatgtg
gaaccatgggagaaaggaagcaggaaaacagcaggccagacagggatgtgcggaggggtt
cgaggtgttggaacaggaggcattgtttctacagcgttttgcctgttatataaattattt
actctgaagttaactcgaaagcaagtgatgggtctcataacacacacagattctccatat
attcgagcccttggatttatgtacataaggtatacacaaccccctacagacctatgggat
tggtttgaatccttccttgatgatgaagaggacctagatgtgaaggctggcggaggctgt
gtaatgaccattggagaaatgctgcgatcttttctcacaaaactcgagtggttttctacc
ttgtttccaagaattcctgttccagttcagaagaatattgatcaacagattaaaacccgg
cccagaaaaataaaaaaagatgggaaggagggcacagaggaaatagacagacatgttgaa
cgcagacgttcgaggtctcctagaagatcactgagtccacggaggtccccaagaagatca
agaagtagaagccatcatcgggagggccatggatcttctagttttgacagagaattggaa
agagagaaagaacgccagcgactagagcgggaagccaaagaaagggagaaagaaaggcga
agatcccgaagtattgatcgagggttggaccgcaggcgtagtaggagtagagaaagacat
agaagtcgtagtcgaagtcgtgatagaaaaggagatagaagggacagggatcgagaaaga
gagaaagaaaatgagaggggtaggagaagagatcgggactatgataaggaaagaggtaat
gaccgagagagagaaagagagcgatcaagagaacgatccaaggaacaaagaagtaggggt
gaggtagaagagaagaaacataaagaagacaaggacgatcggcggcatagagatgaaaaa
aaagattccaaaaaagagaaaaaacacagtagaagtagaagcagagaacgaaaacacaga
agtaggagtagaagtagaaatgcaggaaaacgaagtaggagcaggagcaaagagaaatca
agtaaacataaaaacgaaagtaaagaaaaatcaaataaacgaagtagaagtggaagtcaa
ggaagaactgacagtgttgaaaaatcaagaaaacgggaacatagccccagcaaagaaaaa
tctagaaagcgtagcaaaagcaaagaccgtactcacaaacgagatcacagtgatagtaag
gaccagtctgacaaacatgatcgtcgaaggagccaaagtatagaaccagagagccaagaa
aaacataaaaacaaagatgagactgtgtga

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