Sorex araneus (European shrew): 101540432
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Entry
101540432 CDS
T07854
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101540432 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sara03041
]
101540432 (PRPF38B)
Spliceosome [BR:
sara03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101540432 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
101540432 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
101540432
NCBI-ProteinID:
XP_004620098
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MANNSPALTGNSQPQHQAAAAATQQQQQQQQQQCGGGVPKPAVSGKQGNVLPLWGNEKTM
NLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGV
RGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWD
WFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTR
PRKIKKDGKEGTEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELE
REKERQRLEREAKEREKERRRSRSIDRGLDRRRSRSRERHRSRSRSRDRKGDRRDRDRER
EKENERGRRRDRDYDKERGNDRERERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDEK
KDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQ
GRTDSVEKSRKREHSPSKEKSRKRSKSKDRTHKRDHSDSKDQSDKHDRRRSQSIEPESQE
KHKNKDETV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggcggcg
gccgcgacgcagcagcagcagcaacagcagcagcagcagtgcggcggcggcgtccccaag
ccggcggtgtcgggcaagcagggcaacgtgctgccgctgtggggcaacgagaagaccatg
aacctcaaccccatgatcctgaccaacatcctgtcgtcgccttacttcaaagtgcagctc
tacgagctcaagacctaccacgaggtggtggacgagatctacttcaaggtcactcatgtg
gaaccatgggagaaaggaagcaggaaaacagcaggccagacagggatgtgcggaggggtt
cgaggtgttggaacaggaggcattgtttctacagcgttttgcctgttatataaattattt
actctgaagttaactcgaaagcaagtgatgggtctcataacacacacagattctccatat
attcgagcccttggatttatgtacataaggtatacacaaccccctacagacctatgggat
tggtttgaatccttccttgatgatgaagaggacctagatgtgaaggctggcggaggctgt
gtaatgaccattggagaaatgctgcgatcttttctcacaaaactcgagtggttttctacc
ttgtttccaagaattcctgttccagttcagaagaatattgatcaacagattaaaacccgg
cccagaaaaataaaaaaagatgggaaggagggcacagaggaaatagacagacatgttgaa
cgcagacgttcgaggtctcctagaagatcactgagtccacggaggtccccaagaagatca
agaagtagaagccatcatcgggagggccatggatcttctagttttgacagagaattggaa
agagagaaagaacgccagcgactagagcgggaagccaaagaaagggagaaagaaaggcga
agatcccgaagtattgatcgagggttggaccgcaggcgtagtaggagtagagaaagacat
agaagtcgtagtcgaagtcgtgatagaaaaggagatagaagggacagggatcgagaaaga
gagaaagaaaatgagaggggtaggagaagagatcgggactatgataaggaaagaggtaat
gaccgagagagagaaagagagcgatcaagagaacgatccaaggaacaaagaagtaggggt
gaggtagaagagaagaaacataaagaagacaaggacgatcggcggcatagagatgaaaaa
aaagattccaaaaaagagaaaaaacacagtagaagtagaagcagagaacgaaaacacaga
agtaggagtagaagtagaaatgcaggaaaacgaagtaggagcaggagcaaagagaaatca
agtaaacataaaaacgaaagtaaagaaaaatcaaataaacgaagtagaagtggaagtcaa
ggaagaactgacagtgttgaaaaatcaagaaaacgggaacatagccccagcaaagaaaaa
tctagaaagcgtagcaaaagcaaagaccgtactcacaaacgagatcacagtgatagtaag
gaccagtctgacaaacatgatcgtcgaaggagccaaagtatagaaccagagagccaagaa
aaacataaaaacaaagatgagactgtgtga
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