Sorex araneus (European shrew): 101551617 Help Entry 101551617         CDS       T07854                                  Symbol COL3A1 Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism sara  Sorex araneus (European shrew) Pathway sara04611   Platelet activation sara04820   Cytoskeleton in muscle cells sara04926   Relaxin signaling pathway sara04933   AGE-RAGE signaling pathway in diabetic complications sara04974   Protein digestion and absorption sara05146   Amoebiasis sara05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:sara00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     101551617 (COL3A1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     101551617 (COL3A1)   09152 Endocrine system    04926 Relaxin signaling pathway     101551617 (COL3A1)   09154 Digestive system    04974 Protein digestion and absorption     101551617 (COL3A1)  09160 Human Diseases   09174 Infectious disease: parasitic    05146 Amoebiasis     101551617 (COL3A1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     101551617 (COL3A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     101551617 (COL3A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sara00536]     101551617 (COL3A1) Glycosaminoglycan binding proteins [BR:sara00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101551617 (COL3A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  101551617 NCBI-ProteinID:  XP_004601274 LinkDB All DBs Position Unknown AA seq 1463 aa AA seqDB search MMSFVQKGTWLLLALLQPTLILAQQTQEAIDGGCSHLGQSYADRDVWKPEPCQICVCDSG SVLCDDIICDDQELDCPNPEIPFGECCAVCPQPPAGPTRPPNGYGPRGPKGDPGPPGIPG RNGDPGAPGQPGSPGSPGLPGICESCPTGGQNYSPQFDSYDVKAGGGGGGGFPGPAGPPG PPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPG DRGLPGPPGVKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMG PRGSPGERGRPGLPGAAGSRGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPG SSGSPGQRGEPGPQGHAGSPGPPGPPGNNGSPGGKGEMGPAGIPGAPGLLGPRGPPGPPG TNGAPGQRGGAGEPGKNGAKGEPGPRGERGEAGTPGTPGPKGEDGKDGSPGEPGANGLPG TAGERGAPGMPGRAGPNGLPGEKGPAGERGGPGPAGPRGVAGEPGRDGLPGAQGMRGMPG SPGGPGNDGKPGPPGSQGDSGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPG GPGPQGPAGKNGETGPQGPPGPTGPAGDKGESGAPGLPGPQGLPGTNGPPGENGKPGEPG PKGEAGGPGAPGGKGDAGSPGERGPPGAAGPMGPRGGAGPPGPEGGKGPAGPPGTPGNAG PPGLQGMPGERGGPGGPGPKGDKGEPGGAGADGAPGKDGPRGPTGPIGPPGPAGQPGDKG EGGAPGLPGVAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPG VAGPTGGAGPAGPPGPAGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGASGAPG KDGPPGPPGNSGSPGNPGVSGPKGDAGPPGEKGSPGSQGPPGAPGPLGISGITGARGLAG PPGMPGPRGSPGPQGIKGESGKPGPSGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDG LPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKSGDRGETGPAGPAGAPGPAG SRGAPGPQGPRGDKGETGERGSNGIKGHRGFPGNPGSPGAPGPAGHQGAVGSPGPAGPRG PVGPGGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGA AAISGGGGEKAGGFAPYYGDEPLELKINTEEIMTSLKSISGQLENHISPDGSRKHPARNC RDLKFCHPELQSGEYWVDPNQGCKMDAIKVFCNMETGETCINASPSNVPRKNWWKDSGAK KHVWFGETMDGGFQFNYGNPDLPEDVLEVQLAFLRLLSSRASQNITYHCKNSIAYMDHAS GNVKKALKLMGSNDGEFKAEGNSKFTYTVLEDGCTKHTGEWGKTVFEYRTRKAMRLPIID FAPYDIGGPDQEFGVDIGPVCFL NT seq 4392 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgcaaaaggggacctggttacttcttgctctgcttcaacccactctt attttggcacaacagacccaagaagcaattgacggaggatgctcccatcttggtcagtcc tatgcggatagagatgtctggaagccagaaccatgccaaatatgtgtctgtgactcagga tctgttctctgcgatgacataatatgtgacgatcaagaattagattgccccaacccagag atcccatttggagaatgttgtgcagtatgcccacagcctccagcaggtcctactcgacct cctaatggatatggacctcgaggccctaagggagatccaggtcctcctggcatccctggg agaaatggtgatcctggtgccccaggacaacctggttccccaggttctcccggtcttcct ggaatctgtgaatcatgccctactggtggtcagaactattctccccagttcgattcatat gatgtcaaggctggaggaggaggtggaggaggctttcccggcccagctggtcctcctggt cctcccggtccccctggtacatctggtcatcctggatctcctggttctccaggataccaa ggtccccctggtgaacctgggcaagctggtccttcaggtcctccaggacctcctggtgct ataggtccatctggccctgctggaaaagatggggaatcaggaagaccaggacgacctgga gacagaggactccctgggccccctggtgtcaaaggccctgctggtatgcctggcttccct ggtatgaaaggacacagaggttttgatggacggaatggagaaaagggagaaactggtgct cctggattaaagggtgaaaatggtctgccaggtgaaaacggagctcctgggcctatgggt ccaagaggctctcctggtgagagaggacgaccaggacttcctggggccgctggatctcga ggtaatgatggtgctcgaggaagtgatggacaaccaggtccacccggtccccctggaact gcaggattccctggttctcctggtgctaagggtgaagttggacccgcgggatctcctggt tccagtggttctcctgggcaaagaggtgaacctggaccccagggacatgctggttctcca ggtcctcctggtcctcctgggaataatggcagtcccggtggtaaaggtgaaatgggtcct gctggtattcctggagctcctggacttttaggaccccgtggtcccccaggacctcctggt accaatggcgcgcctggacagcgaggtggtgcaggtgaacctggtaagaatggtgccaaa ggagagccaggacctcgtggtgaacgtggtgaagctggtactccgggtactccaggacct aagggtgaagatggtaaagatggttcacctggagaacctggtgctaatggactcccaggc actgcaggagaacggggtgcacctggaatgccaggacgtgctggacccaatggccttcca ggagaaaagggtcctgctggagagcgtggtggtcctggtcctgcaggtcccagaggggtt gctggagaacctggtcgagatggtctccctggagctcagggaatgaggggtatgcccgga agtccaggaggaccaggcaatgatgggaaaccgggacctcctggcagtcaaggagatagt ggccgaccaggacctccaggtccgtctggtccccgagggcagcctggagttatgggtttc cctggtccaaaaggaaatgatggtgcgcctggcaaaaatggagaacgaggtgggcctggt gggcctggaccacagggcccagctgggaagaatggtgaaaccggacctcagggaccccct ggacctactgggccagctggtgacaaaggagaatcaggagcccctgggctaccagggcca caaggattgcctggaaccaatggtcctccaggagaaaatgggaaacctggtgaaccaggt cccaagggagaagctggtggacctggagctccaggaggcaagggtgatgctggttcccct ggtgaacgcggaccccctggagcagctggtcctatgggacctagaggtggagctggccct cctggtccagaaggaggaaagggccccgctggtcccccagggacacctggtaatgctggc cctcctggtctgcaaggaatgcctggagaaagaggaggacctggaggtcctggaccaaag ggtgacaagggtgaaccaggtggtgcgggtgctgatggtgctcctgggaaagatgggcca aggggtcctactggtccaattggtcctcctggccccgctggtcagcctggagataagggt gaaggtggtgcccctggacttccaggtgtagctggtcctcgtggtggtcctggtgagaga ggtgaacatggacctccaggaccagctggcttccctggtgctccagggcagaatggtgag cctggtgctaaaggagaacgaggtgcccctggtgagaaaggtgaagggggccctcctggt gtcgcgggacccactggtggtgctgggccagctggtccccctggtcctgcaggtgtcaaa ggagaacgaggaagtcctggtggtcctggtgctgctggatttcctggtgctcgtggtctt cctggtcctcctggtagtaatggcaacccaggcccccccggcgctagtggtgctcccggc aaggatggacccccaggtccacctggtaacagtgggtctcctggcaaccccggtgtgtca ggaccaaaaggtgatgctggcccaccaggagagaagggatccccaggcagccagggacct ccaggagctccaggcccacttggaatttcaggaattacaggagcacggggtcttgcagga ccaccaggcatgccgggtcctaggggaagccctgggccacagggtatcaagggtgaaagt ggaaaaccaggacctagtggtctcagtggagaacgtggtccacctggtccacagggtctt cctggtttggccggtacagctggtgaacctggaagagatggtaaccctggatcagatggt cttccaggccgagatggctctcctggtggcaagggtgatcgtggtgaaaatggctctcct ggtgccccaggtgctcctggtcatccaggaccccctggtcctgttggtccctctgggaag agtggtgatagaggagaaactggcccagctggtcctgctggagctccaggtcctgctggc tcccgaggtgctcctggtccccaaggtccacgtggtgacaaaggtgaaacaggtgaacgt gggtctaatggcatcaaaggacatcgaggatttcctggtaatcccggctcccctggtgct ccaggccctgctggccaccaaggtgcagtgggtagtccaggaccggcaggtcccagagga cctgttggacctggtggacctcctggaaaagatggaacgagtgggcatccaggtcctatt gggccacctggacctcggggtaacagaggagaaagaggatccgagggttccccaggtcac ccagggcaacctggccctcctggacccccaggtgctcctggtccatgctgtggtggggct gctgctatctctggtggtggaggtgaaaaagctggtgggtttgctccatattatggagat gaacctttagaattgaaaatcaacacggaagagatcatgacttcactcaaatcgatcagt ggacaacttgaaaaccacattagtcctgatggttctcgtaaacatcctgcccggaactgc cgagatctgaagttctgccacccagaactccagagtggagaatattgggttgatcctaat caaggttgcaagatggatgctattaaggtattctgtaacatggagactggagaaacatgt ataaatgccagtccttcaaatgttccacgtaagaactggtggaaagattctggtgctaag aaacatgtttggtttggagaaaccatggatggcggatttcagtttaactacggcaatcct gatcttcctgaagatgtccttgaggtccagctggctttcctcagacttctttctagccgg gcctcccagaacatcacatatcactgcaagaatagtatcgcctacatggatcatgccagt gggaatgtaaagaaagcgctgaaactaatgggatcaaatgatggcgaattcaaggctgaa ggaaacagtaaattcacatacacagttctagaggatggttgcactaaacacactggcgaa tggggcaagactgtctttgaatatagaacacggaaggctatgagactacctattatagat tttgcaccctatgatattggtggtcctgatcaagaatttggtgtggacattggccctgtt tgctttttataa

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