Sorex araneus (European shrew): 101553557
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Entry
101553557 CDS
T07854
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04360
Axon guidance
sara04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
101553557 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
101553557 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sara04040
]
101553557 (TRPC4)
Ion channels [BR:
sara04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101553557 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
101553557
NCBI-ProteinID:
XP_004619611
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MAQFYYKRSINAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRETWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAPHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWLWTHLCKKKMRRKPESFGTIGVRTQHRRAADNLRRHHQYQEVMRNLVK
RYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLPTVQSAKESSNSADSD
EKSDNEGSSKAKKKNFSLFDLTTLIHPRSAAIASERLNISNGSALVVQEPTREKQRKVNF
VTDIKNFGLFHRRSKQTAAEQNANQIFSVSEEVSRQRAEGPLERNIQLESGGLASRGDLS
IPGLSEQCVLVDHRERNTDTLGLQVGKRMCAFSSEKVVVEDTVPIIPKEKHAKDEDSSID
YDTVTQEDYVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttttattacaaaagaagcattaatgccccctacagagaccgcatccctctg
agaatagtccgagcagaatcagaactctcgccatcagaaaaagcctacttgaatgctgtg
gagaagggtgactatgcgagtgtcaagaaatcccttgaggaagctgaaatttattttaaa
ataaatattaattgcatcgatcctcttgggagaactgcgcttctcattgcaattgaaaat
gagaacttggagctcattgaactactcttaagttttaacgtctatgttggagacgctcta
ctgcacgcgatcaggaaagaagttgtcggggcagtggaactgctactgaaccataagaaa
ccgagtggagagaaacaggtgcctcccatacttcttgataagcaattctctgaattcact
ccggatattacaccaatcattttggcagcccatacaaataattatgagataataaaactt
ttagtccagaaaggagtctctgtacccagacctcatgaagtccgctgtaactgtgttgag
tgtgtctccagttctgatgtggacagtcttcgtcactcacgctcccgactgaatatctac
aaggctttggccagtccatcgcttatagcactatcaagtgaagatccttttcttacagcc
tttcagttgagttgggagctccaagaacttagtaaagtggaaaatgaattcaagtcagaa
tatgaggagctgtcaaggcagtgcaaacagtttgctaaggacctactggatcagacaaga
agttccagagaactggaaatcattcttaattaccgagatgacaatagtctcatagaagag
caaagtggaaatgatcttgcaagactgaaactggcaatcaaataccgtcaaaaagagttt
gttgcccagcccaactgtcaacagttgctggcatcccgctggtatgatgaattcccaggc
tggaggaggcgccactgggcggtgaagatggtgacctgtttcataataggattgcttttc
ccagtcttctctgtgtgctaccttatagctcctaagagcccgctgggactgttcatcaga
aagccttttatcaagttcatctgccacacagcctcctatttgacttttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttaaacaggcaaggcccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggagaaattaaacaa
atgtgggatggaggacttcaagattatatccatgattggtggaatctaatggatttcgtg
atgaactccttatatttagcaacgatctccttgaaaattgtcgcatttgtaaagtacagt
gctctcaatccacgagagacgtgggacatgtggcaccccactctggtagcagaggcactg
ttcgctattgcaaacatcttcagttccctgcgtctgatctcactgttcactgcgaattct
cacctgggacctctccaaatctccctgggaagaatgctcctggacattttgaagtttctc
ttcatatactgccttgtgttgcttgcattcgctaacggcctaaaccaattatacttctat
tatgaagaaacaaaagggttaagctgcaaaggcatacgctgtgaaaagcaaaacaatgca
ttttcaacgttatttgaaacacttcaatctctgttctggtcaatttttggcctcatcaat
ttatatgtgaccaatgtcaaagcgccacatgagttcactgagtttgttggtgccaccatg
tttgggacatacaatgtcatctctctggttgttctcctcaacatgttaatagctatgatg
aataactcttaccaacttatcgctgaccatgcagatatagaatggaaatttgcacgaacg
aagctttggatgagttattttgaagaaggagggactctgcctactcccttcaatgtcatc
ccaagccccaagtctctctggtacctgattaagtggttatggacacacctttgcaagaaa
aagatgagaagaaagccagaaagttttggaacaataggggtaagaacacagcataggcga
gctgctgataatttgagaagacatcaccagtatcaagaagtaatgaggaacctggtgaaa
cgatacgttgctgcaatgattagagatgctaaaactgaagaaggcctgactgaagagaac
tttaaggaactaaagcaagacatatctagcttccgcttcgaagttctgggcttactaaga
ggaagcaaactgcccacagtgcagtccgcgaaggagtcttctaattcagccgactccgat
gaaaagagtgataacgaaggtagtagcaaggccaagaaaaagaacttcagcctttttgat
ttaaccacgctgatccacccgcgatctgcagcgatcgcctcggaaagacttaacataagc
aatggctccgccctggtggtgcaggagcccactcgagagaagcagagaaaagtgaatttt
gtaaccgatatcaaaaacttcgggttatttcatagacgatcgaaacaaaccgctgccgag
caaaatgcaaaccaaatcttctctgtttcagaagaggtttctcgtcaacgggctgaagga
ccactggagagaaatatccaactggaatctggaggattagcttcacggggtgacttgagc
atcccggggctcagtgaacaatgtgtcttagtagaccaccgagaaaggaatacggacacc
ctgggattgcaggtaggcaagagaatgtgtgcgttctcatcagagaaagtggtggtggag
gacacggttcctatcataccaaaggagaagcatgcaaaggacgaggactctagtatagac
tatgacacagtcacccaagaagattatgtgaccacaagattgtga
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