Sorex araneus (European shrew): 101557207
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Entry
101557207 CDS
T07854
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04022
cGMP-PKG signaling pathway
sara04024
cAMP signaling pathway
sara04740
Olfactory transduction
sara04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
101557207 (CNGB1)
04022 cGMP-PKG signaling pathway
101557207 (CNGB1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
101557207 (CNGB1)
04740 Olfactory transduction
101557207 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sara04040
]
101557207 (CNGB1)
Ion channels [BR:
sara04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101557207 (CNGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
101557207
NCBI-ProteinID:
XP_012787510
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All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MLGWIQRVLPQPPATPHDTNMEEEEAEADPGPEPEHTGEETESLPPEDPPEGEDVAVAEP
SPEGTQAPPTLPTTAPQAPVAVGPDVNSPSGRVLSWLGRSMEKVVPQPLRLGAPASSPEA
GAEGLAQAGAQVQGHCSSGCPGQVNGPSDTLRAQDTGPWLLRWFEQNLEKVLPQPPPTCE
VSRERGAGNPGRSYSEKTSGATPNDHDSDLPGPPLEMDSALQVPESPPLSSPSPPEPEEE
PVPEVLLEPQATSLPPPEDRVRLVAWLLHRLEKVLPQPVFHGKAEEQEPEATVTCEVQSI
SILPEGPGQAEPPPDGPGPQDGSGSLRGSEGALASEEEVEDVEETPRELPWIQEEKEEEE
EDGEEEEEEEEEEEELDVLLDSFLVAQALEDPGRVDGPQPGRTSRQPGREVELSRLVQDR
LPGPVAQGNGPLNLADHLPNVPSYRPPLTRIPVLVSRRTALSSSSFAKETRSSVRLLVPA
TKQHPEVQVEDADADRQPLIVEEKPASPERPPPSPAKSDTLAVPGSAAGTHRKRLPSHDD
EAEELRALSPAESPVVAWSDPTTPQGTDGQDRAASTASQNSAVINDRLQELVKLFKERTE
KVKEKLIDPDVTSDEETPKPYLMYILWLFFVVLAWNWNLWLIPVRWAFPFQRPDNIHLWM
MMDYLCDLIYLLDITVFQLRLQFVRGGDIITDKKEMRNNYLKSRRFKMDVLCLLPLDFFY
LKVGVNPLLRLPRCLKYLAFFEFNNRLEAILSKAYVYRVIRTTTYLLFSLHVNSCLYYWA
SDYQGIGSTTWVYDGVGNSYVRCFYWAVKTLITIGGLPDPQTLFEIVFQLLNYFTGVFAF
SVMIGQMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIPRTVQNRVKTWYEYTWHSQGMLD
ESELMVQLPDKMRLDLAIDVNYDIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKK
GEIGREMYIIQAGQVQVLGGPDGKSILVTLKAGSVFGEISLLAVGGGNRRTANVVAHGFT
NLFILDKRDLNEILVHYPESQKLLRKKARRMLRQNKSKEEKKSVLILPPRAGTPKLFNAA
LAAAGKMGGKGGGKLAHLRARLKELAAQEAAARQQQLQEQQGEGAAGPSEPAVRIRMSPG
PDSGEQTLSVEVPEKKKDGE
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctggatccagagggtgctgcctcagcccccggcgacccctcatgacaccaac
atggaggaggaggaggccgaagcggatccagggcctgagccagagcacacgggagaggag
actgaaagtctgccccccgaggacccacccgagggggaggacgtggcagtagctgagcca
agccctgagggaacccaggcgccccccactctgccgaccacagccccgcaggccccggtc
gcagtgggcccagacgtgaacagccccagtggccgggtactgagctggctcggaagaagc
atggagaaggtggtcccgcagcccctgcgcctgggtgcgcccgccagcagccctgaggct
ggcgccgagggcctggctcaggcaggagcacaggtccagggacactgcagctctgggtgc
ccaggacaggtcaatggacccagcgacaccctcagggcccaggacacggggccctggctg
cttcgctggttcgagcagaacctggagaaggtgctgcctcagcccccacctacctgtgag
gtgagccgagaaaggggagctggtaaccctggcaggagctacagcgagaagacctcaggt
gccacccccaacgaccacgactcagatctcccaggaccccctttggaaatggactcagct
ctgcaggttccagagagtccccctttgtccagtcccagccccccagaaccagaggaggag
cccgtcccagaggtgctgctagaaccccaggccacctccctgccaccccctgaggacagg
gtcaggctggtggcgtggctcctgcacaggctggagaaggtcctgccacagccagtgttc
cacgggaaggctgaggagcaggagcccgaggccaccgtgacctgtgaggtgcagagcatc
agcatcctccctgaagggcctggccaggctgagcctcccccagatgggccggggccccag
gacggcagcggcagcctgcggggctcagagggggctctggcgtctgaagaggaggtcgag
gacgtggaagagacgcccagggagctgccctggattcaagaggagaaagaagaggaggag
gaagatggagaggaggaagaggaggaggaggaggaagaggaggagcttgatgtcctgctg
gatagtttcctggtggcgcaggccctcgaggaccccggcagagtagacgggccccagccc
gggaggacctcacgccagccgggccgggaggtggagctgagccgcctggtccaggaccgg
ctgcctggcccggtggcccaggggaacgggcccctcaacctggccgaccacctccccaat
gtgcccagctaccggccccccctcacccgcattcccgtcctcgtctcccggagaacagcc
ttgtccagctccagcttcgccaaggaaaccaggagctccgtccgtctcctagtgcccgcc
acaaagcagcacccagaggtgcaggtggaggacgcagatgctgaccgccagccgctcata
gtggaggagaagccggcctcaccggagcggccgccaccgtcgcccgccaaatcggacacc
ctcgccgtgccgggatcagccgccgggacccacaggaagcggctgccctcccacgatgac
gaggctgaggaacttagggcgctgtctccggccgagtccccggtggtcgcctggtcggac
cccaccacgccgcagggcactgatggccaggaccgcgcggcctccacggccagccagaac
agcgccgtcatcaacgaccggctgcaggagctggtgaagctcttcaaggagcggacggag
aaggtcaaggagaagctcatcgacccggatgtcacctccgacgaggagacccccaagccc
tacctgatgtacatcctgtggctgttcttcgtggtgttggcctggaactggaacctctgg
ctgatccccgtgcgctgggccttccccttccagaggccggacaacatccacctgtggatg
atgatggattacctgtgcgacctcatctacctcctggacatcaccgtcttccagctgcgc
ctgcagtttgtcagggggggggacatcattacggacaagaaggaaatgcggaacaactac
ctgaagtcgcggcgctttaagatggatgtgctctgccttctgcctttggactttttctac
ctgaaggtgggggtgaaccccctcctccgtctgccccgctgcctgaagtacttggccttc
ttcgagtttaacaaccgcctggaagccatcctcagcaaagcctacgtctacagggtcatc
aggaccacgacctacctgctcttcagtctccacgtcaactcctgcctctactactgggcc
tccgactaccagggcattggctccaccacctgggtttacgacggtgtggggaacagctac
gtccgctgcttctactgggccgtgaagaccctcatcaccatcggcggcctgcccgacccg
cagacgctcttcgagatcgtcttccagctcctgaactacttcacgggcgtcttcgctttc
tccgtgatgattggacagatgagggacgtggtgggggcggccaccgccggccagacctat
taccgcagctgcatggacagcaccgtcaagtacatgaacttctacaagataccccggacc
gtgcagaaccgggtcaagacctggtacgagtacacctggcactcacaaggcatgctggac
gagtcggagctgatggtgcagcttcccgacaagatgcggctggacctcgccatcgacgtg
aactacgacatcgtcagcaaagtggcgctcttccagggctgtgaccggcagatgatcttc
gacatgctgaagcggctgcgctccgtcgtctacctgcccaacgactacgtgtgcaagaag
ggggagatcggccgcgagatgtacatcatccaggccggccaggtgcaggtcctgggcggc
cccgacgggaagtccatactggtcacgctgaaggccggatctgtgtttggagagataagc
ttgctggccgtggggggcgggaaccggcgcacggccaacgtggtggcccacggcttcacc
aacctcttcatcctggacaagagggacctgaatgaaatcctggtgcactaccccgagtcc
cagaagctgctccggaagaaggccaggcgcatgctgagacagaacaagtccaaggaggag
aagaagagcgtgctcatcctccccccgcgcgcgggcacccccaagctcttcaatgccgcc
ctggcagcagcagggaagatgggtggcaaaggcggcggcaagctggcacacctgcgggcg
cgactcaaagagctggcagcacaggaggcagcggccaggcagcagcaactgcaggagcaa
cagggggaaggcgcggccgggccctcggagcccgcggtgaggatccgcatgagcccgggc
ccggactccggggagcagacgctgtcggtggaggtccccgagaagaagaaggacggggag
tga
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