Stenotrophomonas aracearum: PDM28_05970
Help
Entry
PDM28_05970 CDS
T10111
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc02024
Quorum sensing
sarc03060
Protein export
sarc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PDM28_05970 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PDM28_05970 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PDM28_05970 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sarc02044
]
PDM28_05970 (ffh)
Enzymes [BR:
sarc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PDM28_05970 (ffh)
Secretion system [BR:
sarc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PDM28_05970 (ffh)
Eukaryotic Sec-SRP protein
PDM28_05970 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
cobW
CbiA
Helicase_RecD
AAA_16
AAA_33
ABC_tran
YqeC
APS_kinase
AAA_31
KTI12
AAA_14
ATP_bind_1
ResIII
DO-GTPase1
nSTAND3
AAA
TsaE
SR_plectin_7
GTP_EFTU
AAA_19
AAA_17
Rad17
AAA_18
NACHT
DUF3731
Motif
Other DBs
NCBI-ProteinID:
WNH49855
UniProt:
A0ABY9YG64
LinkDB
All DBs
Position
1277756..1279135
Genome browser
AA seq
459 aa
AA seq
DB search
MFESLTQRLSGTIERLRGRGRLTEENIREATREVRIALLEADVALPVVQALVERIKVRAV
GQEVLKSLTPGQALIKIVRDELTAVMGSSASDLNLNVPAPAIILMAGLQGAGKTTTVGKL
AKHLKDKRKKKVMVVSADVYRPAAIEQLKTLADQVGVLFFPSSADQKPEAIVRAAIDDAR
KSFVDVLLVDTAGRLAIDDAMMAEIKALHAAVNPAETLFVVDAMTGQDAANTAKAFGEAL
PLTGVVLTKTDGDARGGAALSVRYITGKPIKFVGVSEKPDGLDVFHPDRIASRILDMGDV
LSLVEQVEQQVDKDKAQKLAEKVAKGKKFDLNDMRDQLEQMQNMGGIGGLMDKLPGLGQI
PEHLKQQVSQGKEVPRMIAIINSMTKKERRNPGLLNGSRRARIARGSGLTPADVNKLMKQ
YQQMEKMMSKMAGGGMKGMMRSMKGMMGAMGGRGGLPFR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagtccctgacccagcgcctctccggcaccatcgagcggctgcgtggccgcggt
cgcctcaccgaggaaaacatccgcgaggccacccgcgaggtccgcatcgcgctgctggaa
gccgacgtcgccctgccggtcgtgcaggcactggtcgagcgcatcaaggtgcgcgcggtc
ggccaggaagtgctcaagtcgctgacccccggccaggcgctgatcaagatcgtccgcgac
gaactgaccgcggtgatgggctcgtccgcctcggacctgaacctcaacgtgccggccccg
gcgatcatcctgatggccggcctgcagggtgcgggcaagaccaccacggtgggcaagctg
gccaagcacctgaaggacaagcgcaagaagaaggtgatggtggtgtcggccgacgtctac
cgtccggccgcgatcgagcagctcaagaccctggccgaccaggtcggcgtgctgttcttc
ccgtccagcgccgaccagaagccggaagccatcgtgcgcgcggcgattgacgatgcgcgc
aagtcgttcgtggacgtgctgctggtcgataccgccggccgcctggccatcgacgacgcg
atgatggctgagatcaaggccctgcacgcagcggtcaatccggccgaaaccctgttcgtg
gtcgatgccatgaccggccaggacgcggccaataccgccaaggccttcggcgaggcgctg
ccgctgaccggcgtggtgctgaccaagaccgacggtgacgcccgtggcggtgccgcgctg
agcgtgcgctacatcaccggcaagccgatcaagttcgtcggtgtcagcgaaaagccggac
ggcctggacgtgttccacccggaccgtatcgccagccgcatcctggacatgggcgacgtg
ctgtcgctggtggagcaggtcgagcagcaggtcgacaaggacaaggcgcagaagctcgcc
gagaaggtcgccaagggcaagaagttcgacctgaacgacatgcgcgaccagctcgagcag
atgcagaacatgggcggcatcggcggcctgatggacaagctgccgggcctgggccagatc
ccggagcacctcaagcagcaggtcagccagggcaaggaagtgccgcgcatgatcgccatc
atcaattcgatgaccaagaaggaacgccgcaacccgggcctgctcaacggctcgcgccgc
gcccgcatcgcgcgcggttccggcctgaccccggccgacgtcaacaagctgatgaagcag
tatcagcagatggaaaagatgatgagcaagatggccggcggcggcatgaagggaatgatg
cgcagcatgaagggcatgatgggcgccatgggcggccgcggcggcctccccttccggtga
DBGET
integrated database retrieval system
