Sphingomonas aliaeris: H5J25_11030
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Entry
H5J25_11030 CDS
T07559
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sari
Sphingomonas aliaeris
Pathway
sari02024
Quorum sensing
sari03060
Protein export
sari03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
H5J25_11030 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
H5J25_11030 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H5J25_11030 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sari02044
]
H5J25_11030 (ffh)
Enzymes [BR:
sari01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
H5J25_11030 (ffh)
Secretion system [BR:
sari02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
H5J25_11030 (ffh)
Eukaryotic Sec-SRP protein
H5J25_11030 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_25
AAA_22
Zeta_toxin
AAA_33
ABC_tran
NACHT
GTP_EFTU
AAA
AAA_14
6PF2K
AAA_16
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QQV76084
UniProt:
A0A974NSF9
LinkDB
All DBs
Position
complement(2361529..2363034)
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AA seq
501 aa
AA seq
DB search
MFESLSDRLGGVFDRLRGRGALTEADVRGAMREVRVALLEADVALPVARDFVEKVTEAAV
GQNVLRSVTPGQQVVKIVNDALVEMLGSDASELELGVTPPAVIMMVGLQGSGKTTTTAKI
AKRLSAGQGGRERKKVLMASLDVNRPNAQEQLAVLGTQADVQTLPIVTGQQPVDIARRAM
QAAKLQGFDVLMLDTAGRLHVDQALMDEMRAVADVAQPTEILLVVDSLTGQDAVNVAKNF
SDQVTLTGVVLTRMDGDARGGAALSMRAVTGKPIKFAGMGEKLDALEAFHPARVAGRILG
MGDVVGLVERAAEAVQQDEAEAMAAKLAKGQFDLNDLRAQLAQMRRMGGLGALAGMIPGM
AKAKAAMAGGGMDERILLRMDAMITSMTQKERTKPEMINAKRKIRIAKGSGTTVQDVNKL
LKMHLEMSTAMKKIRKMGGLKGMAAMFGKGGLGGALGGLGGGVGGGGLPNLGGGGGSGLP
GLGGGQAKLPPGFENLLNKKK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaaagcctgagtgatcgccttggcggtgtgttcgatcggttgcgcggccgtggc
gcgctgaccgaggcggacgtgcgcggggcgatgcgcgaggtgcgggtcgccttgctcgag
gccgacgtcgcactgccggtcgcgcgtgatttcgtcgagaaggtgacggaggccgccgtc
ggccagaacgtgttgcgctcggtcacgccgggtcaacaggtcgtcaagatcgtcaacgac
gcgctggtcgagatgctggggtcggatgcgtccgaactcgaactcggcgtaacgccacct
gccgtcatcatgatggtcggcctgcaagggtcgggcaagacgaccacgacggcgaagatc
gccaagcggctgtcggccgggcagggcggtcgcgagcgcaagaaggtgttgatggcgtcg
ctggacgtcaatcgcccgaacgcgcaggaacagctggccgtgctcggcactcaggccgac
gtgcagacgctgccgatcgtcaccgggcagcagccggtcgatatcgcgcgtcgtgcgatg
caggcggcgaagttgcagggcttcgacgtcctgatgctcgatactgcgggtcgcctgcat
gtcgatcaggcgttgatggacgagatgcgcgccgtcgccgatgtcgcacaaccgaccgag
attttgctcgtggtcgactcgctgaccgggcaggacgcggtcaacgtcgccaagaacttc
tccgatcaggttaccctgaccggtgtcgtgctgacccgcatggacggcgatgcgcgcggc
ggtgccgccctgtcgatgcgcgccgtgactggcaagccgatcaagtttgcgggcatgggc
gaaaagctcgatgcgctggaggcgtttcatccggcgcgtgtcgcaggtcgcatcctcggc
atgggcgatgtcgtcggcctggtcgaacgtgcggccgaagccgttcagcaggacgaagcc
gaggcgatggcggcgaagctggccaagggccagttcgacctcaacgatcttcgcgcgcag
cttgcgcagatgcgacgcatgggcgggctcggcgcgctggccggaatgatccccggcatg
gcgaaggccaaggcggcgatggccggcggcgggatggacgaacggatcctgctgcgcatg
gacgcgatgatcacgtcgatgacgcagaaggagcggaccaagcccgaaatgatcaatgcc
aagcgcaagatcaggatcgcgaagggcagcgggacgaccgtgcaggacgtcaacaagctg
ttgaagatgcatcttgagatgtcgaccgcgatgaagaagatccggaagatgggtgggctg
aagggcatggcggcgatgttcggcaagggcggcctgggcggtgcgcttggcggtcttggc
ggcggtgtcggcggcggggggcttcccaatctgggcggcggcggaggatccggtctgccg
ggtctcggcggcggtcaggcgaagcttcctccgggcttcgaaaatctgctcaacaagaag
aaataa
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