Candidatus Sarcina troglodytae: HH195_06540
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Entry
HH195_06540 CDS
T06935
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sarj
Candidatus Sarcina troglodytae
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sarj03110
]
HH195_06540 (clpB)
Chaperones and folding catalysts [BR:
sarj03110
]
Heat shock proteins
HSP100
HH195_06540 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_16
AAA_22
nSTAND3
AAA_14
ATPase_2
Sigma54_activat
IstB_IS21
TniB
RuvB_N
AAA_7
RNA_helicase
AAA_18
NACHT
AAA_24
Roc
TsaE
Zeta_toxin
T2SSE
ABC_tran
bpMoxR
AAA_25
Torsin
ResIII
AAA_19
DNA_pol3_delta2
NBD_SMAX1
TolA_bind_tri
Motif
Other DBs
NCBI-ProteinID:
QPJ85594
LinkDB
All DBs
Position
complement(1458096..1460693)
Genome browser
AA seq
865 aa
AA seq
DB search
MNADKMTLRVQQSLNDAYEIAVKYNNQQLDIIHLFSALINQEDGLIPNIFEKMGVDIKSL
ERETNLKIDSLPKVLGEAAKSTGVTATRRINEVLIKAEQLSKEFGDSYVSVEHVMLAIMD
IDSKGVGLILDKFSISKKEFLEVLNKIRGSQKVDTQDPEGTYDALSKYGTNLIDLAKKHK
LDPVIGRDEEIRRAVRILSRRTKNNPILIGEPGVGKTAIVEGLANRIVKGDVPEGLKNKT
IFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSDGNIILFIDEIHTIVGAGKTDGAMDAG
NLIKPLLARGELHCIGATTFDEYRQYIEKDKALERRFQPVIVNEPTVEDAISILRGLKER
FEIHHGIRIHDSAIVAAATLSDRYIQDRYLPDKAIDLIDEAGAMVRSEIDSLPTELDRIR
RKLLTLETEKEALSMEDDEVSKIKLEDLEKELAVLKEKNNEMTAKYEKEKSQITEIKNLK
SELDTLRGMAEEYERQYDLNKVAEIKYGRIPEIEAKIKEKEADMEQNHDTSMLKEEITEE
EISQIVSKWTGIPVTRLVEGEREKLLRLEEELKMRVIGQEEATEAVANAVIRARAGLKDE
NKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIIRIDMSEYMEKHAVSRLVGPPPGYI
GYEEGGQLTEAVRRQPYSVILFDEIEKAHEDVFNMFLQILDDGRLTDNKGKTVDFKNTII
IMTSNIGSNYLLENNENGEISKEARDAVMNEMKLRFKPEFLNRVDDIIMFKPLNLEGIKK
IIDIFLKDVKKRLKHRNIDMNVTDSAKEILAKQGYDPVYGARPLKRFIGNVLETDIAKKI
IAGEIKDNSVIIVDTDGNNIVIKNN
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgctgataaaatgacactaagggttcaacaaagtttaaatgatgcatatgaaata
gcagtaaaatataataatcaacagctagatataatacatttattctcggctcttataaat
caagaagatggattaattcctaatatattcgagaaaatgggagttgatattaaatcactt
gagagagaaactaacttaaaaatagatagtcttccaaaagttttaggagaagctgctaaa
tcaacaggagttacagcaactaggagaataaatgaagttcttataaaagctgagcaacta
tctaaagaatttggagattcttatgttagcgtagagcatgttatgttagcaattatggat
attgattcaaagggcgtagggcttattttagataaattttctattagtaaaaaagaattt
ttagaagtattaaataaaattagaggaagtcaaaaggtagatacacaagatccagaaggc
acttatgatgctttatctaaatatggtacaaatcttattgatttggctaaaaagcataaa
ttagatcctgtgattggaagagatgaagaaataagaagagcggttagaattctatcaagg
agaacaaaaaataatcctatacttataggtgaacctggagttggtaaaaccgcaatagtt
gaaggtttggcaaatagaatagtaaagggagatgttcctgaaggattaaaaaataaaacg
atattctctttagatatgggagcattaattgcaggagctaagtatagaggtgagtttgaa
gaaagattaaaagctgttttaaaagaagttcaaaactcagatggaaatataattttattt
atagatgaaattcatacaatagttggtgctggtaaaacagatggagctatggatgctggt
aatttaataaaaccgctattagcaagaggggaattacactgcataggtgctacaactttt
gatgaatatagacaatatatagaaaaagataaggccttagagagaagattccaaccagtt
atagttaacgaaccgacagttgaagatgctatatctatattaaggggattaaaagaaagg
tttgaaattcatcatggtataagaattcatgattctgcaatagttgcagcagcaacactt
tcagatagatatattcaagataggtatctaccagataaagcgatagatttaattgatgaa
gctggtgctatggtaagatcagaaatagattcactacctacagaacttgatagaataaga
agaaaacttttgacacttgaaacagaaaaagaagcattgtccatggaagatgatgaagtt
tctaagattaaattagaggatttagagaaagagttagcagttcttaaagaaaaaaataac
gagatgactgctaaatatgaaaaggaaaaatctcaaataactgaaattaaaaatttaaaa
tctgagcttgacactttaagaggtatggcagaagaatatgaaagacaatatgatttaaat
aaggtagcagagattaaatatggtagaattccagaaattgaagctaaaataaaagaaaaa
gaagctgatatggaacaaaatcacgatacttccatgcttaaagaagaaataacagaagaa
gaaatttctcaaatagtttctaaatggactggaattcctgtaactagactagttgaaggt
gaaagagagaaacttttaagacttgaagaagaattaaaaatgagagtaataggtcaagaa
gaggcaacagaagctgtagctaatgctgttataagggcaagggctggacttaaagatgaa
aataaaccaataggttcttttatattcttaggacctacaggagttggtaaaacagaactt
gccaaaactttagctagaaatctttttgatagtgaggataatataataagaatagatatg
tcagaatatatggaaaaacatgctgtatctagacttgttggacctcctccaggatatatt
ggatatgaagaaggtggtcaattaactgaagcagttagaagacaaccatattctgttata
ttgtttgatgaaatagaaaaagctcatgaagatgtatttaatatgtttttacaaatatta
gatgatggaagacttactgataataaaggtaaaaccgtggattttaaaaatacaataata
attatgacatcaaatattggtagtaactatcttctagaaaacaatgaaaatggtgaaata
tctaaagaggcaagagatgctgtaatgaatgaaatgaaattaaggtttaagcctgaattt
ttaaatagggttgatgacattataatgtttaagccattaaatcttgaaggaattaaaaag
ataattgatatattcttaaaagatgttaaaaaacgattaaaacatagaaatattgacatg
aatgtaacagattctgctaaagaaattttagctaagcaagggtatgacccagtttatgga
gcaagaccacttaaaaggtttataggaaatgttttagaaacagatattgcaaaaaaaata
atagctggagagataaaagataactctgttataatagtagatacagatggaaacaatatt
gttataaaaaataattaa
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