Salmo salar (Atlantic salmon): 100194717
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Entry
100194717 CDS
T04363
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100194717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100194717
03012 Translation factors [BR:
sasa03012
]
100194717
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100194717
Translation factors [BR:
sasa03012
]
Eukaryotic type
Release factors
100194717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
100194717
NCBI-ProteinID:
XP_014055301
UniProt:
A0A1S3RSQ4
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All DBs
Position
ssa05:35215733..35222754
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AA seq
443 aa
AA seq
DB search
MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLYVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRLHGAESIGTENDEKTLYLTPEQEKDK
SHFTDKETGQDHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGCLR
YRVDFQAIDYQAEDDEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccctaacgcagcggacaggaacgtggagatatggaaaatcaagaagttg
attaaaagtttggaagctgcccgaggtaatggaaccagtatgatctcgctgatcattccc
cctaaggaccagatctccagagtggccaagatgttagctgatgagtttgggacggcctcc
aacatcaagagcagggtcaacaggctctctgtgctcggggccattacctctgtacagcag
agactaaagctatacaataaggtgccccctaatggcctggtggtgtactgtgggaccatt
gtgacagatgagggcaaagagaagaaagtcaacatagactttgagccttttaaacccatc
aacacctctctgtacctatgtgacaacaagttccacactgaggcgctgacggccctgctg
tccgatgacagtaagtttggtttcatagtgatcgatggtagcggggctctcttcgggaca
ctccaggggaacaccagagaggtcctgcacaagttcacagtggacctgcccaaaaaacat
ggcagaggaggtcagtctgctctgcggtttgcccgtctgaggatggagaagagacacaac
tatgtgaggaaggtggctgagacagctgtccagctctatgtgtccaacgacaaggtcaac
gtggccggaatggtcctagcagggtctgccgacttcaagactgagctcagccagtccgac
atgtttgaccctaggttacaggcgaagattctgaagctggtggacatctcgtacggagga
gagaacggcttcaaccaggccatcgagctgtcggcagaggtcctctccaacgtcaagttc
atccaggaaaagaagctcatagggcggtactttgatgagatcagtcaggacacggggaag
tactgttttggggtggaggacacactcaaagccctggagatgggagctgtggagatcctc
atcgtctatgagaacctggacaccatgcgttacatccttcgcctgcacggggccgagagc
attggaacagagaacgatgagaagactctgtacttaacaccagagcaggagaaagacaag
tcccacttcacagacaaggagactgggcaggaccacgagctgattgagagcatgcctctg
ctggagtggttcgccaacaactacaagaagtttggagccacgctggagattgtcacagac
aagagtcaagaaggctcccagtttgtcaagggcttcggaggcatcgggggatgcttgcgg
tacagggtggatttccaggccatagattaccaggcagaggacgatgagtttttcgattta
gatgactactag
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