Salmo salar (Atlantic salmon): 100196000
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Entry
100196000 CDS
T04363
Symbol
fen1, FEN-1, FEN1A, fen1b
Name
(RefSeq) flap structure-specific endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03030
DNA replication
sasa03410
Base excision repair
sasa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100196000 (fen1)
03410 Base excision repair
100196000 (fen1)
03450 Non-homologous end-joining
100196000 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sasa03032
]
100196000 (fen1)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
100196000 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
100196000 (fen1)
DNA replication proteins [BR:
sasa03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
100196000 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
100196000 (fen1)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
100196000 (fen1)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100196000 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
100196000
NCBI-ProteinID:
XP_014015192
UniProt:
B9EMY6
A0A1S3NIC5
LinkDB
All DBs
Position
ssa19:74281103..74286268
Genome browser
AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADQAPSAIKEQDIKNYFGRKIAIDASMCMYQFLVAVRQDGNVLQNENGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEAGEQ
ENIDKFSKRLVKVTQQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM
DGLTFGTGVLLRHLTASEAKKLPIQEFQFTRLLQDINLTHEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIRQHGSIEEILENIDSSKHPAPEDWLYKEARGLFLQPDVVDCSTVDLKWSE
PDEDALIQFMCAEKQFSEDRIKNGCKKILKSRQGSTQGRLDTFFTITGSLSSKRKEPETK
GSNKKKQKTGATPGKFKKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcacgggcttgcaaagttgattgcagaccaggcaccatctgctataaaggaa
caagacatcaagaactactttgggcggaaaatagcaatagacgcctccatgtgtatgtat
cagttccttgtcgctgtcagacaggatggtaatgtgctccaaaacgagaatggggagacc
acaagccatctcatgggcatgttctaccggactatccgcatgctggagcacgggatcaag
cctgtctatgtgtttgatggcaagcccccacagctgaagtcaggagagctggagaagaga
ggagagaggagggctgaggctgagaaactgctggcccaggcacaggaagcaggggagcag
gagaacattgataagttcagtaaacgtctggtgaaagtcacccagcaacacaacgacgag
tgcaagaagctgctcaccctgatgggggtgccatacatcgaggctccgtgtgaggccgag
gcgagctgtgctgctctggttaaggctgggaaggtgtttgccactgcaacagaggatatg
gacggtctgacttttggaacaggggtcctactaaggcacctcactgccagcgaagccaaa
aagcttcctatccaggagttccagttcactcgccttctgcaggacattaatctgacccat
gagcagttcatagacctgtgcatactgctgggctgtgactactgtggtaccatcaaggga
atcgggcccaagagagccattgacttgatcagacaacacggctccatcgaggagattctg
gagaacatcgactcgtctaagcaccctgccccagaggactggctgtataaggaagccaga
gggctgttcctgcagcctgacgtggtggactgctccaccgtagacctcaagtggagcgag
cctgacgaggatgccctcatccagttcatgtgtgcagagaaacagttcagtgaggaccgc
atcaagaacggctgtaagaagattctgaagagccgacagggcagcacacagggacgactg
gacaccttcttcaccatcacagggtctctgtcatcaaaacgcaaggaacctgagacaaag
ggatccaacaagaagaaacagaagaccggtgcaaccccaggcaaatttaagaagggcaaa
tag
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integrated database retrieval system
