Salmo salar (Atlantic salmon): 100286406 Help Entry 100286406         CDS       T04363                                  Name (RefSeq) collagen alpha-1(I) chain   KO K06236   collagen type I alpha Organism sasa  Salmo salar (Atlantic salmon) Pathway sasa04510   Focal adhesion sasa04512   ECM-receptor interaction sasa04518   Integrin signaling sasa04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sasa00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100286406    04518 Integrin signaling     100286406  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100286406   09142 Cell motility    04820 Cytoskeleton in muscle cells     100286406  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sasa00536]     100286406 Glycosaminoglycan binding proteins [BR:sasa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100286406 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  100286406 NCBI-ProteinID:  XP_014059932 UniProt:  A0A1S3S6G4 LinkDB All DBs Position ssa06:41487399..41509068 Genome browser AA seq 1449 aa AA seqDB search MFSFVDIRLALLLSATVLLARGQGEDDRTAGSCTLDGQFYNDRDVWKPEPCQICVCDSGT VMCDEVICEDTSDCPNPVIPHDECCPICPDDGFQEPKVEGPQGDRGAKGEPGPAGFPGND GIPGQPGLPGPPGPPGPPGLGGNFSPQMSGGFDEKSGGGMSMPGPMGPMGPRGPPGPPGS SGPQGFTGPPGEPGEAGSSGPMGPRGPAGPPGKNGDDGESGKPGRPGERGASGPQGARGF PGTPGLPGIKGHRGFSGLDGAKGESGPAGPKGEAGASGENGAAGAMGPRGLPGERGRAGP NGAAGARGNDGAAGAAGPPGPTGPAGAPGFPGGPGAKGEVGAQGARGGEGPQGSRGEAGN PGPAGAAGPAGNNGADGNPGTKGAPGSSGIAGAPGFPGPRGPPGPQGAGGAPGPKGNTGE VGATGAKGEAGAKGESGPAGVQGPAGPAGEEGKRGGRGEPGSAGARGAPGERGAPGSRGF PGSDGAAGPKGGPGERGGAGVAGAKGNTGEPGRNGEPGMPGSKGMTGSPGSPGPDGKTGP SGAGGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEGGKPGERGVMGPVGAVGAPGKDGD VGAPGAPGAAGPSGERGEQGAGGPPGFQGLPGPQGAIGETGKPGEQGLPGEGGAPGAAGS RGDRGFPGERGAPGPSGPAGARGSPGSAGNDGAKGEAGAAGAPGGQGPPGLQGMPGERGA GGLPGLKGDRGDQGVKGADGAGGKDGIRGMTGPIGPNGPAGSPGDKGETGAPGPGGPTGA RGAPGERGESGAPGPAGFAGPPGGDGQPGAKGEAGDNGAKGDGGAQGPAGPTGAPGPQGP AGNTGAKGARGAAGPPGATGFPGAAGRVGPPGPSGNNGPPGPPGPGGKEGQKGNRGETGP SGRPGELGAAGPPGAQGEKGQPGADGPNGPAGTPGPQGIGGQRGIVGLPGQRGERGFPGL PGQLGEPGKQGPGGPSGERGPPGPMGPPGLAGAPGESGREGTPGNEGSSGRDGAAGPKGE RGESGAAGASGAPGPPGAPGPVGPAGKSGDRGESGPAGPAGIAGPAGPRGPSGPAGARGD KGEAGEAGERGMKGHRGFTGMQGPSGPAGPSGESGPAGASGPAGPRGPSGSAGAAGKDGM SGLPGPIGPPGPRGRSGEMGPSGPPGPPGPPGPPGPPGGGFDMGFIAQPAQEKAPDPFRH FRADDANVMRDRDLEVDTTLKSLSQQIENIRSPEGTKKNPARTCRDLKMCHPDWKSGEYW IDPDQGCTQDAIKVYCNMETGETCVYPTEAEIPKKSWYTSKNIKEKKHVWFGEAMTDGFQ FEYGSEGSSAQDVNIQLTFLRLMATEASQNITYHCKNSIAYMDQQSGNLKKSLLLQGSNE IEIRAEGNSRFTYSVTEDGCTSHTGAWGKTVIDYKTTKTSRLPIIDIAPMDVGAPNQEFG IEVGPVCFL NT seq 4350 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatattcggttagcgctgttgctcagcgcaacagtgcttttggca agaggacaaggcgaggacgatcgcaccgccggcagctgtacgttggacggtcaattctac aacgacagagatgtctggaaacccgagccatgccagatctgcgtgtgcgatagcggcacc gtcatgtgcgacgaagttatctgtgaggacacatccgactgccccaatccagtgatcccc cacgacgaatgctgccccatctgccccgacgacggcttccaggagccaaaggttgaggga ccccagggtgatcgcggagccaagggagagccaggacctgctggtttccccggcaacgat ggtattcccggccagcccggccttcctggacccccaggcccccctggaccccctggtctt ggcggaaacttctcccctcagatgtctggtggttttgatgagaagagcggcggtggcatg tccatgcccggccccatgggccccatgggtcctcgtggtccccctggacctcctggttca agtggacctcagggtttcactggcccccctggtgagcctggtgaggctggttcttctggt cccatgggcccccgtggtcctgctggtccccctggcaagaacggagatgatggtgagtct ggcaagcctggtcgccccggtgagcgtggagcttccggcccacagggagctcgtggcttc cccggaacccccggccttcccggcatcaagggacacagaggattcagcggtcttgatgga gctaagggggagtctggccctgccggacccaagggagaggctggtgcatccggtgagaac ggagccgctggagccatgggaccccgtggtctgcctggtgagagaggccgtgctggtccc aacggagctgctggtgctcgtggtaacgatggtgctgctggtgctgctggtcctcctggc cccactggccccgctggtgcccctggtttccccggtggccctggagccaagggagaggtt ggtgcccagggagctcgtggtggcgagggaccccagggatcccgtggagaggctggtaac cccggacccgctggcgctgctggccctgctggaaacaacggtgctgatggaaaccccggt accaagggtgcccctggttcttctggtattgctggcgctcctggcttccctggaccccgt ggaccccccggaccccagggtgctggtggagctcccggacccaagggtaacactggtgag gttggtgctactggagccaagggagaggctggtgctaagggagagtctggccccgctgga gtccagggacccgccggccctgctggtgaggaaggcaagagaggaggccgtggtgagccc ggtagtgctggtgcccgtggagcccccggcgagcgcggtgcccctggtagccgtggtttc cctggttctgatggagctgctggccccaagggtggccctggtgagcgtggtggtgctgga gttgctggagctaagggtaacactggtgagcctggccgcaacggcgagcctggtatgcct ggatccaagggtatgactggtagccctggcagccctggtcccgatggcaagactggcccc tctggtgccggtggtcaagatggtcgccccggacctcccggccccgttggagccagaggc cagcccggagtcatgggattccccggacctaagggagccgcaggtgagggtggcaagcct ggtgagagaggagtcatgggacccgttggtgctgttggcgctcccggcaaagatggtgat gttggtgctcctggtgctcctggtgctgccggaccttctggagaacgaggcgagcaggga gccggtggcccccctggattccagggacttccaggaccccaaggtgctattggtgagact ggaaagcccggagagcagggtcttcccggtgagggtggtgcccctggtgccgctggatcc agaggtgacagaggtttccccggtgagcgtggtgcccctggcccatctggacccgctggt gcccgtggctctccaggctctgctggtaacgatggtgctaagggagaggctggtgccgca ggtgcccccggtggccagggaccccctggcctgcagggaatgcccggagagcgtggtgct ggtggtctgccaggtctgaagggagacagaggtgaccaaggagtcaagggtgctgatggc gccggtggtaaggatggcatccgtggtatgactggccccatcggacccaacggccctgct ggctctcctggtgacaagggagagactggcgctcctggacctggtggccctactggtgcc cgtggtgcacctggtgagcgtggtgagtctggtgcccctggacccgctggattcgctggg cctcctggtggtgatggtcagcctggtgctaagggagaggctggagataacggtgccaag ggtgacggtggtgcccagggacctgctggacctactggagcccctggacctcagggtccc gctggaaacaccggagctaagggcgcccgtggtgctgctggtccccctggtgccactggt ttccctggtgctgctggtagagtcggacctcccggcccatctggcaacaacggacccccc ggacccccaggccctggtggaaaggaaggacaaaagggtaaccgtggtgagactggcccc tccggtcgtcctggtgagcttggcgctgccggaccccctggtgcccagggagagaaggga cagcctggtgcagatggtcccaatggacccgctggaactcccggacctcagggtattggt ggacagcgtggtattgttggtctgcctggacagagaggcgagcgcggtttccccggcctc cccgggcaactgggagagcctggcaagcagggacctggcggcccctctggtgagcgtgga ccccccggacccatgggaccccctggactggctggagcacctggtgagtctggtcgtgag ggaactcctggtaacgagggatcttctggtcgcgatggtgctgctggacccaagggagag cgtggtgagtctggtgctgctggtgcttccggtgcccccggaccccctggcgcccctgga cccgtcggccctgctggaaagtctggtgaccgtggagagtctggtcctgctggccccgct ggtattgctggccctgctggtccccgtggcccatctggacccgctggagctcgtggagac aagggagaggctggcgaggctggagagagaggcatgaagggacatagaggattcactggc atgcagggaccctctggccccgccggaccatctggagagtcaggacctgctggagcctct ggccccgctggacctagaggaccttctggatctgctggtgccgccggtaaagatggtatg agcggtctgcccggccccatcggacctcccggaccccgtggtcgctctggagagatggga ccctctggaccccctggccctcccggtccccctggcccccccggacctcccggcggtgga ttcgacatgggcttcattgctcagcctgctcaggagaaggcccccgatcccttccgtcac ttccgtgccgacgacgccaacgtgatgcgcgaccgcgacctggaggtagacaccactctc aagagcctgagccagcagattgagaacatccgctctcccgagggcaccaagaagaacccc gcccgcacctgcagagacctgaagatgtgccaccccgactggaagagcggcgagtactgg atcgaccctgaccagggctgcacccaggatgccatcaaggtttactgcaacatggagacc ggcgagacctgcgtctaccccaccgaggccgaaatccccaagaagagctggtacaccagc aagaacatcaaggagaagaagcacgtctggttcggcgaggcaatgaccgatggcttccag tttgagtatggcagtgagggttccagcgctcaggatgttaacatccagctgaccttcctg cgccttatggccactgaggccagccagaacatcacataccactgcaagaacagcatcgcc tacatggaccagcagtccggcaacctcaagaagtccctgctgctccagggctccaacgag atcgagatcagagccgagggcaacagccgcttcacatacagcgtcaccgaggacggctgc acgtcgcacactggtgcatggggcaagacagtcatcgactacaagacaacgaaaacatcc cgtctgcctattattgacatcgctcctatggacgttggtgcacccaatcaggaatttggc attgaagttggcccagtctgcttcttgtaa

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