Salmo salar (Atlantic salmon): 106565230
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Entry
106565230 CDS
T04363
Name
(RefSeq) eukaryotic translation initiation factor 4B-like
KO
K03258
translation initiation factor 4B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
106565230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106565230
03012 Translation factors [BR:
sasa03012
]
106565230
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106565230
mRNA cycle factors
Stress granule specific factors
106565230
Translation factors [BR:
sasa03012
]
Eukaryotic type
Initiation factors
eIF-4
106565230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
106565230
NCBI-ProteinID:
XP_013987585
UniProt:
A0A1S3L9S3
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All DBs
Position
ssa12:complement(41135376..41207204)
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AA seq
634 aa
AA seq
DB search
MAAAAKKKGNKKGKTLTLTDFLAEDSGSGGNAPPPQPSYAKSTSWADETDDLEGDVSTSW
HTGEDSYRAPAIDRNILPTAPRSAREPNVDRSRLPRSPPYTAFLGNLPYDVSDESIKDFF
RGLAISAVRLPREPSNPERLKGFGYAEFDDVDSLLRALTLNEENLGNRRIRVDIADQSND
KEGRDNGQMGGRDRMGRMGDMAGPDKTDSDDWRARPAADDGPPKREESAFGSRDRYGDRD
GLRRDNDRGFGGDRDRGFGGRDRYDDRGGENGAFGSRRDRDDGGRRAFGSGYRRDDDYQS
GGGGGSRYGARDRYGGDREGRYERQDEGREERGGPIERPKLVLKPRSMAKEEQQAGSGGA
TPAAARSSGRASIFGAAKPVDTAAKEREVEEKLQRQLEEDKSKGFDRKPRDRDRDPSWRN
EEPPSERSRTGSESSHPGSTSGGRASRRRESERSVENEVFSGKEDDPPSPGSRPSSANSS
TFSSKEPLKVMPAPPPKENAWVKRPALSTGSSEGCAPISTSDTAPPKLSSSSANERGSSK
DENKVDGVRLDRGPPRGRGGAAVPGAGRGRGEGANRDRRREEDRKAKRRGRDSRPAPEPK
KYEESPTLKFSSASKYAALLMDREQGDDAENGVE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagctaagaaaaaggggaataagaaggggaagaccctgaccctcactgac
ttcctcgcagaggacagtgggagtgggggcaacgctccaccaccgcaaccgagctacgcc
aagtccaccagctgggctgacgagaccgatgacctggaaggagatgtgtccacctcctgg
cacacaggggaggacagttaccgggcccccgcaatagaccgtaacatcctgcccacagct
ccacggtcggcccgtgagcccaatgtggaccgctcacgcctcccccgcagccccccctac
actgccttcctgggcaaccttccctacgacgtctcagatgaatctatcaaggacttcttt
cggggcctagcgatcagtgcggtgcgcttgccacgggagcccagtaacccagagaggctg
aagggctttggctacgcagagtttgacgacgtggactctctcttgagggcgctgactctc
aacgaggagaacctgggaaaccgcaggatccgggtggatattgcagatcagtccaacgac
aaggaggggagagacaatggtcagatgggtggacgagacaggatgggccgcatgggagac
atggcaggccccgacaagacagacagtgatgactggagggcccggccagctgccgacgat
ggacccccaaagagagaagaatccgccttcgggtcacgcgaccgctacggagaccgtgac
gggctgcgaagggacaacgaccgcggcttcggcggcgaccgggaccgcggcttcggcggc
agagaccgctatgacgaccggggaggtgagaacggagcctttggctcccgcagggatagg
gatgacggcgggcgacgtgccttcggcagtgggtaccgccgtgacgatgactatcagagt
ggcggaggtggcggtagccgctatggggcccgggatcgctatggcggagaccgggagggc
cggtatgagaggcaggacgaagggcgtgaggagagaggtggtccgatcgaaaggcccaag
ttggtcctgaagccgcgcagcatggccaaggaggagcagcaggccggcagcggtggggct
actccggcagccgcccgcagctctggtcgagcctccatcttcggagcggccaagcccgtg
gacacagcggctaaggagcgggaggtggaggagaagctccagaggcagctggaagaggac
aagtccaagggcttcgataggaaacctcgcgacagagacagggacccaagctggaggaat
gaggagccaccttctgagcggtcccgcacaggaagtgagtcatcacatccaggaagtacc
tctggagggagagcctcacggcgcagagagagcgagcgctcagtggagaacgaagtattc
agcggtaaggaggacgaccctccctctcccgggtctcgcccctcttccgccaactcttcc
accttctcctccaaggagcccctcaaggtgatgcctgcaccgccacctaaggagaatgcc
tgggtcaagcggcctgcgttgagtaccgggtccagcgagggatgcgcccctatctccacc
agtgacacggcacctcccaaactgagctcgagttctgcaaatgaaagaggatctagtaag
gacgagaataaagtggacggtgtgcgtctggaccggggccccccacgggggagagggggg
gccgcagtgcctggagcagggcggggccgaggagagggggccaacagagaccgacgaagg
gaggaagacagaaaggctaaaagaagaggccgagactcaagacctgcaccagagccaaag
aaatacgaagagtcccccaccctcaaattcagctcagccagtaaatacgctgctctgcta
atggacagagagcaaggagatgatgcagagaatggtgtggaataa
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