Salmo salar (Atlantic salmon): 106567804
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Entry
106567804 CDS
T04363
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106567804
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106567804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_SPT8
NBCH_WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
106567804
NCBI-ProteinID:
XP_013993032
UniProt:
A0A1S3LQ16
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All DBs
Position
ssa13:complement(80304112..80327351)
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AA seq
1770 aa
AA seq
DB search
MAEEHCSQIEAELYYLIARFLQSGPCKKSAQILVEELEEYELIPKRWSWDGKQYKRNFQD
WVILNQHIPADYLLRVCQQIGPLIDKEAPPSVPGVQTLLGLGRQSLLRTAKSCSHTEWSG
TAVAALHRGRPPEPPVSFGKPPSIVSIMGARQATGTARFGHALPSYTYQHMKMHRRILGH
LSSVYCVAFDRSGRRIFTGSDDCLVKIWSTDDGRLLSTLRGHAAEISDMAVNYENTLIAS
ASCDKVIRVWCLRTCAPITVLQGHAASITSIQFCPAVKGPMRYLASTGADGMVCLWQWHS
LSMKFVDRPVKFIERSRPGVQISTSSFSCGGMFLATGGTDHVIRVYYLGSETPMKLSELD
AHMDKVVVVQFCNNSNSLRFVSGSRDGTARIWHYQQQEWKSITLDIATRLPGSAVVNGED
KTKLVPTMVAWDRGDRTVVTAVSNYLLKVWSSTTGQLLHVLSGHDDEVFVLEAHPFDRRI
MLSAGHDGNIYMWDLAKGAKIRNFFNMIEGQGHGAAFDCKFSADGQHFACTDSHGHLLIF
GFGCSRPYEKIPDQMFFHTDFRPLIRDANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPTH
YQRLVPGRESCKEEHLVPQLGYMANGDGDVVEQVIGQLTADEAQGESPLDVLIRQLQNQP
DERRDQEREPEGEGAGEGPEVVGSPSNVGLRRSGQVEGVRQMHHNAPRSQMATERDLLAW
SRRVVVNEVQQGVLRVMEETRRAKGEVECSIYNTERKRKPVPSSPKTEQQAPCKRSLRRT
QRKKKQTRPPPAYQTRSAGERRPVDRGRVSDSQMDSDSDGEAEEQAEASDASSDGETQWQ
SDSSSSVSSSDYSDWTADAGINLQPPKRTSRRQVRPPGGSSSSEEAEGQGEEAGRKQAEE
KKKKKPKQTKQKKPSSSLSLAGCDAEEWLPPSWIMETIPRRSPFVPQMGDELMYFRQGHQ
AYVRAVHRAKAYSINPQKQPWNKLNLRDQESVKVVGIKYEVGPPTLCCLKLAFLHPISGK
MTNESFSLKYHDMPDVIDFLVLQQFYDEAKEHNWQTGVRFRSIIDDAWWFGSVEDQQPLQ
PEYPDSLFQCYAVKWDNSEREKMSPWDMEPISDEAELPEEVGDGVVVTEEEVKARLYSPQ
EGEWGAHSRDEDCQRVIFGINELLTLDLAKAFASPVDLRDYPLYCTVVAYPTDLSTIRRR
LENRFYRRISALMWEVRYIEHNARTFNEPQSPIVAAAKVVTDVLLRYIGDQSCTDILDLC
HKVKTELSSGEDETAEVDVDSDTPGTSTGQQRANPSPKKRGVVLDVRAWRGQCRELLRRM
MDGPDSDPFRQPVDLFTYPDYRDIIDTPMDLGTVTEALVVGNYENPMEFAKDVRLIFSNS
KAYTPNKKSQIYTMTLSLSAFFERQIISIISDYKSAVQNQRRRSRQSVSYRKRLNSGGSS
PPTSRPSSPKGKHKSGKKATPKKSQPSSKSQSRRPSQASESSSVVVDEDSQPSSSSSSGT
GSHIGGPGADRVTRSRTTPIKNSGITTQERNRPLTNGARQSHRRRVLQEGEASGGSNSSS
SSSSSSSSLSSSSDSDSDSESEVGKFVEGGDHDYSKAPRLKTRHKAKGKMAVSGKRRRKE
EQEAEEAPERAKRARVQAEDEEDEEDDKQDEDNEEEEEEPQTQPQREEEEEDDEEEPEEE
EEPEEKEESEEDDSEQGEGGTEGGQKSSSRSKSGQVNTRNQGRRTVLYNDESDEESGTTE
DPLNLGMSRSGRVRRMTEKARVSHLMGWNH
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaacattgttcacaaatcgaagctgaattgtattacctcattgccagattt
ctccagtcgggaccgtgcaaaaaatcggcacagatcctggttgaagaactggaagagtat
gagttgatcccgaaacgatggagttgggacggcaaacaatacaaacgaaacttccaagac
tgggtgatcttgaaccagcacatcccagcagactacctgctgagagtatgccagcagatc
ggtcctctcatagacaaggaggccccacctagcgtccctggggtccagaccctcctgggc
ttgggaaggcagtctttgcttcgcacagctaaaagttgtagccacacagaatggagcgga
actgctgttgctgcgctgcaccggggtcgccccccagaaccaccagtcagctttgggaag
ccccccagcatcgtgtccatcatgggtgctcggcaggctactggcactgcccgcttcggt
catgccctgccgtcctacacctaccagcatatgaagatgcacaggcgcatcctgggccac
ctgtcctctgtgtactgtgtggccttcgaccgcagtggcagacggatatttacgggttct
gatgactgtctggtgaagatctggtccacggatgacggccggctgctgtccaccctgcgt
ggccatgcggccgagatctccgacatggcagtgaactacgagaacacgctcatagcctcg
gccagctgtgacaaggtcatccgagtgtggtgcctgcgaacctgcgcccccatcactgtg
ctgcagggccatgcagcctccatcacctccattcagttttgtccggcggttaaaggaccg
atgcggtacctggcctccaccggagcagacggcatggtgtgtttatggcaatggcactcg
ctcagcatgaagtttgttgaccggccagtcaagttcattgagcggtcaaggcctggggtc
cagatttccacctcctccttcagctgtggtgggatgttcctggccacgggcggcactgat
catgtgatcagggtgtattacctcggctctgaaacacccatgaagctgtctgagttggat
gctcacatggacaaagttgtggtagtccagttttgtaacaacagtaacagcctgaggttt
gtgagtggcagtcgggacggcacggctaggatctggcattaccagcagcaggagtggaag
agcattactctggacatagccaccagactaccagggagtgctgttgtgaatggcgaggac
aagaccaagctggtgccgacgatggtggcctgggaccgcggtgaccgcacggttgtaaca
gcggtctctaattacctgctcaaagtgtggagctccaccacgggccagctgctgcatgtg
ctgtctggtcatgatgatgaggtgtttgtcttggaggcccacccatttgaccgccgcatc
atgctgtctgccggtcacgacggcaacatctacatgtgggacctcgccaagggagcgaag
atccgcaacttcttcaacatgattgagggccaaggccacggtgcagcgtttgactgtaag
ttctcagctgatggacagcactttgcctgcactgactcccatggccacctgctcatcttt
ggcttcggctgcagcagaccctatgagaagattcctgaccagatgttctttcacactgac
ttccggcccctgatccgggacgccaataactttgtcctggacgagcagacccagcaggcg
ccccacctcatgccccctcccttcctggtggacgtggacgggaacccccaccccacccac
taccagcgcctggtgcccggcagggagagctgcaaggaggagcatctggtgccccagctg
ggctacatggccaatggtgatggtgatgtggtggagcaggtgattggccagctaacggca
gatgaggctcagggagaaagcccattggatgtcctgatcagacagttgcaaaaccagccg
gatgagaggcgggaccaagagagagagcctgaaggagagggagctggtgagggaccagag
gtagtgggatcgccctctaacgtgggcctgaggaggagtggtcaggtggagggggtgcgt
cagatgcaccacaacgcccctcgcagtcagatggccacggagagggacctgctggcctgg
agcaggagggttgtggtcaacgaagtccagcaaggggtcctccgggtgatggaggagacc
agacgggccaaaggtgaggtggagtgttccatctacaacacagagaggaagaggaagcct
gtacctagttctcctaagactgagcagcaggctccctgcaagcgctccctgcggcggacc
cagaggaagaagaagcagaccagacctccaccagcgtaccagacccgctcagcaggagaa
cgtcgccctgtggacagggggagggtctctgacagccagatggactcggacagcgatgga
gaggcagaggagcaggcagaagccagcgacgcttcctctgatggggaaacacagtggcag
agtgacagcagttccagtgtctcctccagtgactactctgattggacagctgatgcgggg
atcaacctccagccccccaagcgaaccagcagaaggcaggtccgaccgcccggtggatcc
agcagttcagaggaggccgagggccagggagaggaggccggaaggaagcaggcagaggag
aagaagaagaagaagcccaagcagaccaaacagaagaaacctagctcgtctctgtctctg
gctgggtgtgatgcggaggaatggcttcccccctcctggatcatggagaccatcccccgc
cgctctccttttgtgccacagatgggtgacgagctgatgtacttcaggcagggccaccag
gcctacgtcagggcagtgcacagggccaaggcctacagtatcaatcctcagaaacagccc
tggaacaagctcaacctcagggaccaggagtctgtgaaggtggttggcattaagtatgag
gtgggccctcccaccctctgttgcctaaaactggccttcctgcaccccatctcaggcaaa
atgaccaatgagtcattctccttaaagtaccatgacatgccggatgtcattgatttcctg
gtgctccagcagttctatgacgaagctaaagagcacaactggcagactggtgtgcgcttc
cggagcatcatcgatgacgcctggtggtttggctcggtggaggaccaacagccactccaa
ccagagtacccagacagcctgttccagtgctacgctgtcaagtgggataatagcgagagg
gagaaaatgagcccttgggacatggagcccatttctgatgaagcggagttgccagaagag
gttggtgacggggtggtggtgacggaggaggaggtgaaggctcgcctctacagcccccag
gagggggagtggggggctcactcacgggacgaggactgccagagggtcatctttggcatc
aacgagctgcttacactggacctggccaaggcgtttgcgtcacctgtggacctgcgggat
taccccctctactgcactgtggtggcctaccccactgacctcagcaccatccgcagacgg
ctggagaaccgcttctacaggaggatctcagctctgatgtgggaggtgcgctacatcgag
cacaacgcccgcactttcaacgagccccagagccccatcgtggcagcagccaaggtggtg
actgacgtgctcctccgctacatcggggaccagagctgcacagacatcttagatctgtgc
cacaaggtgaagacggagctgagcagtggagaggacgagactgctgaggtggacgtggac
tctgacactccagggacatccacaggacaacagcgggccaatcccagtcctaaaaagcgt
ggggttgtgttagacgtgcgtgcgtggcggggccaatgtcgggagctgctgcggcgtatg
atggacggccctgactctgaccccttcagacagcctgtggacctcttcacctacccagac
tatcgagacatcatagacactcccatggacctggggactgttacagaggcgctggtcgtc
ggaaactacgagaaccccatggagtttgccaaagatgtccgtctcatcttcagcaactcc
aaagcatatacacccaacaagaagtcacagatctacaccatgaccctgagcctatcagcc
ttcttcgaaagacaaatcatctccatcatctccgactacaagtctgcagtccagaaccag
cggcggaggagtcgccagagtgtcagctacaggaagaggctgaacagtggaggcagctcc
cctcccaccagccgaccctccagtcctaaagggaagcacaagtcggggaagaaagcaaca
cccaaaaaatcccagccctcatctaagagccagtctcgcaggccatctcaggcgtcggag
tcgagcagcgtggtggtggatgaggacagccagccctcgtcctcctccagctccgggaca
ggcagccacattgggggcccaggggccgaccgtgtcacccgcagtcggaccacacccatc
aagaactctggtattacaacacaggagcgtaacagacctctcaccaatggtgccagacag
agccaccggcgaagagtgctgcaggagggggaggcgtctggaggatccaatagctcctcc
tcttcatcatcgtcttcctcatcattgtcctcctcatcagacagtgattcagacagtgag
tcggaggttgggaagttcgtggagggaggagatcacgactacagcaaagctccccgctta
aagacccgccacaaagccaagggcaagatggccgtttctgggaagaggaggcggaaagaa
gaacaggaggcggaggaggctccagagagagccaagagagcacgggtccaggcagaggat
gaggaggatgaagaagatgacaaacaagatgaagacaatgaggaggaggaggaggagcca
cagacgcaaccgcagagagaggaggaggaggaggatgacgaggaggagcctgaggaggaa
gaggagcctgaggaaaaggaggaatcggaggaggacgattctgagcagggtgagggtggg
acggagggcggtcagaaaagcagtagccgcagtaagtctggtcaggtgaacacccggaac
cagggccgcaggacagtgttgtacaacgacgagtcagatgaagagtcggggaccacagag
gaccccctcaacctaggcatgtcccgctcaggacgggtacgccgcatgaccgaaaaggcc
cgtgtcagccacctcatgggctggaaccactga
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integrated database retrieval system
