Salmo salar (Atlantic salmon): 106571265
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Entry
106571265 CDS
T04363
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106571265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106571265
03036 Chromosome and associated proteins [BR:
sasa03036
]
106571265
Spliceosome [BR:
sasa03041
]
Complex B
Other components
Prp19-related factors
106571265
Complex C
106571265
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
106571265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_16
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
106571265
NCBI-ProteinID:
XP_013999568
UniProt:
A0A1S3M8P9
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All DBs
Position
ssa15:26721531..26728040
Genome browser
AA seq
785 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNIALWLKY
AEMEMKNRQVNHARNIWDRAITILPRVNQFWYKYSYMEEMLGNIAGCRQVFERWTEWEPE
EQAWHSYINFELRYKEVDKARSIYERFVIVHPDVKNWIKYARFEEKHGYIAHGRKVFERS
VEFFGEEHVDENLFVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKFYTVFEKKF
GDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADPDTAREVYERAIANIP
PIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYLACLDLIPHKKFTFAKMWLLYGQF
EIRQKNLQAARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFASENCTT
WIKFSELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRL
LQRTQHVKVWISYAQYELSIDTSDRLQRCRGIFEEANKGLRSCEEKEERLMLLESWKEFE
QEFGSDTTRERVKKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKRQQQEEDDEEDDEEDEEENNGGVDRGRVEEVRGKEMEGEENGRGERGIDKEVTEDL
ASPSSEKPIVSEPVPEEVPKESTHDDRDDSDESSSGSSSSSSSSSDSDNGGEKQPRKSNK
DSVKD
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcatctactgcggcagggaaacagaggataccgaaagtagcgaaggtaaaaaacaaa
gctcctgcagaggtacaaatcacagctgagcagttgctcagggaggcaaaggagagggag
ctcgagcttctgccaccgccacccaagcaaaagatcactgatgaagaggagttgaacgat
tacaagttgaagaagaggaagggatttgaagacaacatcagaaagaaccgtactgttatc
agcaactggataaaatacgctcaatgggaggagagcctgaaagaagtccagagggctcgc
tctatttacgagcgtgctctggatgtagaccaccgaaacatagctctgtggctgaagtat
gccgagatggagatgaagaaccggcaggtgaaccacgcccgcaacatctgggacagagcc
atcaccatcttgccccgtgtcaaccagttctggtacaagtacagttacatggaagagatg
ctgggcaacatcgctggctgcagacaggtgtttgagcgctggacagagtgggaaccagag
gaacaagcttggcactcctacatcaactttgagctgcgctacaaggaagtggacaaggcc
cgctccatctatgagagatttgtgattgtccaccctgatgtgaagaattggattaagtac
gcccgttttgaagagaagcatggctacatcgcccatgggaggaaggtgtttgaaagatca
gtggagttctttggcgaggagcatgttgatgagaacctttttgtggctttcgccagattt
gaagagaaacagaaagagtttgagagagttcgagtcatctacaaatacgccctggacaga
attcctaagcagcaggctcaggagctcttcaagttctacaccgtatttgagaagaagttt
ggagaccggaggggaatcgaggacgtcatcgtcagcaagaggagatttcagtatgaagag
gaagtcaaggcaagcccacacaattatgacgcatggtttgattacctacgcctggtggag
agtgatgcggaccctgacactgccagggaggtctatgagagagccatcgccaatatccct
cctatacaggagaagaggcactggagaagatacatttacctgtggataaactacgctcta
tatgaagaactggaggtcaaggacccagagagaacaaggcaggtgtacctggcatgtctg
gatctcatccctcacaaaaagttcacgtttgccaagatgtggctactctacggacagttt
gaaatccgccagaagaacctccaagctgctagacgaggcttgggcacagccattggtaaa
tgtccaaagaacaagctgtttaagggctacattgaactggagctgcagctccgagagttt
gaccgatgtaggaagctttatgagaagtacctggagtttgcctccgagaactgcaccacc
tggatcaagttctctgagctggagaccatcctgggagacacagagagggcccgggccatc
ttcgagctggccatcggacagccacgactggacatgccagaggtgttgtggaagtcctac
atcgactttgaaatcgagcaggaagagtatgacaacaccagaggtctctacaagagactg
ttgcagcgcacacagcacgtcaaggtctggatcagctatgcccagtatgagctgtccatc
gatacctctgaccggctgcagaggtgtagggggatctttgaggaggccaacaagggcctg
aggagctgtgaggagaaggaggagcgtctgatgctgctggagtcttggaaggagtttgag
caggagtttggttcagacacgaccagggaaagggtgaagaaactgctgccagagaaggtg
aagaagaggagaaagctcacggcagaggacgggtcggatgcagggtgggaggagtactac
gactacatcttccctgaggatgcagccaaccagcccaacctcaagctgctcgccatggcc
aagatgtggaagaggcagcaacaagaagaagatgatgaagaagacgatgaagaggatgag
gaagaaaacaatggaggagtggataggggtagagtggaggaagttaggggcaaagaaatg
gagggagaagaaaacggaagaggggagagaggaatagacaaagaagttacagaagattta
gcatcaccatcatcagaaaagcctatagtcagtgagcctgtgcctgaagaagtccccaaa
gagagcacacacgatgacagagatgattctgatgaaagcagtagtggaagcagcagcagc
agcagcagtagtagtgacagtgacaatggtggtgagaaacagcccaggaagagcaataag
gactcagtgaaagattag
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